BLASTX nr result

ID: Glycyrrhiza24_contig00031451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031451
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541793.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   106   2e-21
ref|XP_003546761.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   104   7e-21

>ref|XP_003541793.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Glycine
            max]
          Length = 990

 Score =  106 bits (264), Expect = 2e-21
 Identities = 46/67 (68%), Positives = 56/67 (83%)
 Frame = -3

Query: 396  YMKFSHSRSLTRFFPQKGHIGRVHRIDHPKDVSNSSIEYPPNGNCGMFVNYGSNPMCGIT 217
            Y+KFSHSR +TR FP+KGH+ +V RIDH K V +SS E+PPNGNCG++V YGSNP+CG T
Sbjct: 923  YLKFSHSRPVTRVFPEKGHVEQVQRIDHSKRVGHSSNEHPPNGNCGLYVYYGSNPVCGTT 982

Query: 216  RTSS*CE 196
            RTSS CE
Sbjct: 983  RTSSQCE 989


>ref|XP_003546761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Glycine
            max]
          Length = 989

 Score =  104 bits (260), Expect = 7e-21
 Identities = 48/68 (70%), Positives = 57/68 (83%), Gaps = 1/68 (1%)
 Frame = -3

Query: 396  YMKFSHSRSLTRFFPQKGHIGRVHRIDHPKDVSNSSI-EYPPNGNCGMFVNYGSNPMCGI 220
            Y+KFSHSR +TR FP+KGH+ +V RIDH K VS+SS  E+PPNGNCGM+V YGSNP+CG 
Sbjct: 921  YLKFSHSRPVTRVFPEKGHVKQVQRIDHSKRVSHSSSNEHPPNGNCGMYVYYGSNPVCGT 980

Query: 219  TRTSS*CE 196
            TRTSS CE
Sbjct: 981  TRTSSQCE 988


Top