BLASTX nr result

ID: Glycyrrhiza24_contig00031424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031424
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517845.1| PREDICTED: ATP-dependent RNA helicase DHX8-l...    74   2e-11
ref|XP_003520120.1| PREDICTED: ATP-dependent RNA helicase DHX8 [...    72   5e-11
dbj|BAD35264.1| putative RNA helicase [Oryza sativa Japonica Gro...    71   1e-10
ref|NP_001057036.1| Os06g0192500 [Oryza sativa Japonica Group] g...    71   1e-10
gb|EAZ36110.1| hypothetical protein OsJ_20422 [Oryza sativa Japo...    71   1e-10

>ref|XP_003517845.1| PREDICTED: ATP-dependent RNA helicase DHX8-like [Glycine max]
          Length = 705

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/47 (82%), Positives = 41/47 (87%)
 Frame = -3

Query: 141 NRQPQSSAWRQRIAQQRKSLPIASVEKRLVEEVRKNDVLIIVGETGS 1
           NRQ Q S  RQ+I QQRKSLPIA VEKRLVEEVRK+DVLIIVGETGS
Sbjct: 11  NRQTQFSERRQKIIQQRKSLPIAPVEKRLVEEVRKHDVLIIVGETGS 57


>ref|XP_003520120.1| PREDICTED: ATP-dependent RNA helicase DHX8 [Glycine max]
          Length = 705

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 38/47 (80%), Positives = 40/47 (85%)
 Frame = -3

Query: 141 NRQPQSSAWRQRIAQQRKSLPIASVEKRLVEEVRKNDVLIIVGETGS 1
           NRQ Q S  RQ+I QQRKSLPI  VEKRLVEEVRK+DVLIIVGETGS
Sbjct: 11  NRQTQFSERRQKIIQQRKSLPITPVEKRLVEEVRKHDVLIIVGETGS 57


>dbj|BAD35264.1| putative RNA helicase [Oryza sativa Japonica Group]
           gi|51091123|dbj|BAD35820.1| putative RNA helicase [Oryza
           sativa Japonica Group]
          Length = 698

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/52 (69%), Positives = 42/52 (80%)
 Frame = -3

Query: 156 SNANRNRQPQSSAWRQRIAQQRKSLPIASVEKRLVEEVRKNDVLIIVGETGS 1
           S A+  +Q  ++  RQ I QQRKSLPIASVEKRL+EEVRKND LI+VGETGS
Sbjct: 7   SGASPQKQQHNARRRQLIRQQRKSLPIASVEKRLIEEVRKNDTLIVVGETGS 58


>ref|NP_001057036.1| Os06g0192500 [Oryza sativa Japonica Group]
           gi|51090787|dbj|BAD35265.1| RNA helicase-like [Oryza
           sativa Japonica Group] gi|51091124|dbj|BAD35821.1| RNA
           helicase-like [Oryza sativa Japonica Group]
           gi|113595076|dbj|BAF18950.1| Os06g0192500 [Oryza sativa
           Japonica Group]
          Length = 386

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/52 (69%), Positives = 42/52 (80%)
 Frame = -3

Query: 156 SNANRNRQPQSSAWRQRIAQQRKSLPIASVEKRLVEEVRKNDVLIIVGETGS 1
           S A+  +Q  ++  RQ I QQRKSLPIASVEKRL+EEVRKND LI+VGETGS
Sbjct: 7   SGASPQKQQHNARRRQLIRQQRKSLPIASVEKRLIEEVRKNDTLIVVGETGS 58


>gb|EAZ36110.1| hypothetical protein OsJ_20422 [Oryza sativa Japonica Group]
          Length = 518

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/52 (69%), Positives = 42/52 (80%)
 Frame = -3

Query: 156 SNANRNRQPQSSAWRQRIAQQRKSLPIASVEKRLVEEVRKNDVLIIVGETGS 1
           S A+  +Q  ++  RQ I QQRKSLPIASVEKRL+EEVRKND LI+VGETGS
Sbjct: 163 SGASPQKQQHNARRRQLIRQQRKSLPIASVEKRLIEEVRKNDTLIVVGETGS 214


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