BLASTX nr result

ID: Glycyrrhiza24_contig00031423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031423
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520480.1| PREDICTED: cell division cycle protein 48 ho...   116   2e-24
ref|XP_002277745.2| PREDICTED: cell division cycle protein 48 ho...    90   2e-16
emb|CBI32813.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_002308870.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
ref|XP_003624920.1| AAA family ATPase CDC48 subfamily [Medicago ...    82   6e-14

>ref|XP_003520480.1| PREDICTED: cell division cycle protein 48 homolog AF_1297-like
            [Glycine max]
          Length = 1036

 Score =  116 bits (291), Expect = 2e-24
 Identities = 58/74 (78%), Positives = 63/74 (85%)
 Frame = +3

Query: 6    ICREAGVAAIKESLDASVITMEHLKMAIQQFQPTEVQSYQKLSAKFQRAVHCCDIKVESN 185
            ICREA VAAI+ESLDASVITMEHLKMAI+Q QP+EV SYQKLS KFQRAV CCDIK E N
Sbjct: 955  ICREAAVAAIEESLDASVITMEHLKMAIKQIQPSEVHSYQKLSTKFQRAVRCCDIKDEFN 1014

Query: 186  HMQCNS*STWFNIW 227
             M C+S ST F+IW
Sbjct: 1015 DMPCDSRSTQFSIW 1028


>ref|XP_002277745.2| PREDICTED: cell division cycle protein 48 homolog AF_1297-like [Vitis
            vinifera]
          Length = 1030

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 45/74 (60%), Positives = 56/74 (75%)
 Frame = +3

Query: 6    ICREAGVAAIKESLDASVITMEHLKMAIQQFQPTEVQSYQKLSAKFQRAVHCCDIKVESN 185
            ICREA +AAI+++LDAS ITMEHLK AI+Q QP+E+QSYQ+LS KFQR VH  D + ES 
Sbjct: 953  ICREAAIAAIEDNLDASEITMEHLKTAIRQVQPSELQSYQELSTKFQRLVHSSDKRDESG 1012

Query: 186  HMQCNS*STWFNIW 227
                +S STW  +W
Sbjct: 1013 LPLRSSKSTWMPLW 1026


>emb|CBI32813.3| unnamed protein product [Vitis vinifera]
          Length = 956

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 45/74 (60%), Positives = 56/74 (75%)
 Frame = +3

Query: 6    ICREAGVAAIKESLDASVITMEHLKMAIQQFQPTEVQSYQKLSAKFQRAVHCCDIKVESN 185
            ICREA +AAI+++LDAS ITMEHLK AI+Q QP+E+QSYQ+LS KFQR VH  D + ES 
Sbjct: 879  ICREAAIAAIEDNLDASEITMEHLKTAIRQVQPSELQSYQELSTKFQRLVHSSDKRDESG 938

Query: 186  HMQCNS*STWFNIW 227
                +S STW  +W
Sbjct: 939  LPLRSSKSTWMPLW 952


>ref|XP_002308870.1| predicted protein [Populus trichocarpa] gi|222854846|gb|EEE92393.1|
            predicted protein [Populus trichocarpa]
          Length = 1042

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 44/73 (60%), Positives = 55/73 (75%)
 Frame = +3

Query: 6    ICREAGVAAIKESLDASVITMEHLKMAIQQFQPTEVQSYQKLSAKFQRAVHCCDIKVESN 185
            ICREA VAAI+E++DAS + M+HLK AIQQ QPTE+ SYQ LSAKFQR VH  D K E  
Sbjct: 970  ICREAAVAAIEENIDASEVPMQHLKTAIQQVQPTEINSYQDLSAKFQRLVHSSD-KDELG 1028

Query: 186  HMQCNS*STWFNI 224
            + +C+S +  F+I
Sbjct: 1029 NQECSSRANSFSI 1041


>ref|XP_003624920.1| AAA family ATPase CDC48 subfamily [Medicago truncatula]
            gi|355499935|gb|AES81138.1| AAA family ATPase CDC48
            subfamily [Medicago truncatula]
          Length = 1046

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/51 (74%), Positives = 46/51 (90%)
 Frame = +3

Query: 3    HICREAGVAAIKESLDASVITMEHLKMAIQQFQPTEVQSYQKLSAKFQRAV 155
            HICR+A +AA++ES DASV+TM+H KMAI+Q QP+E QSYQKLSAKFQRAV
Sbjct: 929  HICRQAALAALEESFDASVVTMKHFKMAIKQVQPSEFQSYQKLSAKFQRAV 979


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