BLASTX nr result

ID: Glycyrrhiza24_contig00031381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031381
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609773.1| Pre-mRNA polyadenylation factor fip1 [Medica...   129   2e-28
ref|XP_003534814.1| PREDICTED: uncharacterized protein LOC100816...   101   5e-20
ref|XP_003547360.1| PREDICTED: uncharacterized protein LOC100816...    89   3e-16

>ref|XP_003609773.1| Pre-mRNA polyadenylation factor fip1 [Medicago truncatula]
           gi|355510828|gb|AES91970.1| Pre-mRNA polyadenylation
           factor fip1 [Medicago truncatula]
          Length = 1110

 Score =  129 bits (325), Expect = 2e-28
 Identities = 63/93 (67%), Positives = 74/93 (79%)
 Frame = +3

Query: 3   HFKDRNCNNDPRSDECEFEFLNRSYRMPSSFAEREMESLNNKHEEQFPQIDRELKRYAGR 182
           HFKDRNC++D   D+ EFEFLN+ YR PSSFAEREMESLNN+HEEQF QIDR  +RY GR
Sbjct: 664 HFKDRNCDSDQWFDD-EFEFLNKIYRTPSSFAEREMESLNNRHEEQFLQIDRAQERYTGR 722

Query: 183 GRHHNRLPLVLDTLWSGKPEDECLKYTYNQASY 281
           GRH +R+ L +DT WSG+ EDE  KY +NQ SY
Sbjct: 723 GRHPDRVSLDVDTPWSGRTEDEFPKYAHNQNSY 755


>ref|XP_003534814.1| PREDICTED: uncharacterized protein LOC100816396 [Glycine max]
          Length = 1121

 Score =  101 bits (252), Expect = 5e-20
 Identities = 55/94 (58%), Positives = 68/94 (72%), Gaps = 2/94 (2%)
 Frame = +3

Query: 3   HFKDRNCNNDPRSDECEFEFLNRSYRMPSSFAEREMESLNNKHEEQFPQIDRELKRYAGR 182
           HF DRNC +D   DECEF+FLN+SYRM S+ AERE+E L+N  EEQFP IDR+ +R   R
Sbjct: 705 HFIDRNCIDD--FDECEFKFLNKSYRM-STIAERELEFLDNYREEQFPHIDRDWRRSVCR 761

Query: 183 GRHHNRLPLVLDTLWSG--KPEDECLKYTYNQAS 278
           GRH++  PLVL+ L SG  + ED C KYT+ Q S
Sbjct: 762 GRHYDSPPLVLNNLCSGIMEVEDNCQKYTHCQTS 795


>ref|XP_003547360.1| PREDICTED: uncharacterized protein LOC100816009 [Glycine max]
          Length = 1098

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 2/91 (2%)
 Frame = +3

Query: 12  DRNCNNDPRSDECEFEFLNRSYRMPSSFAEREMESLNNKHEEQFPQIDRELKRYAGRGRH 191
           +RNC +D   DECEFEFLN+SYRM S+ AERE E L+N  EEQFP I R+ +R   RGR 
Sbjct: 678 ERNCIDD--FDECEFEFLNKSYRM-STVAEREQEFLDNNREEQFPHIYRDWRRSVRRGRR 734

Query: 192 HNRLPLVLDTLWSG--KPEDECLKYTYNQAS 278
            ++ PLVL+ L SG  + ED C KYT+ + S
Sbjct: 735 FDKPPLVLNNLCSGTMEVEDNCQKYTHFRTS 765


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