BLASTX nr result

ID: Glycyrrhiza24_contig00031372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031372
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547332.1| PREDICTED: pentatricopeptide repeat-containi...   138   4e-31
ref|XP_003594555.1| Pentatricopeptide repeat-containing protein ...   136   2e-30
ref|XP_002515948.1| pentatricopeptide repeat-containing protein,...   134   6e-30
ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containi...   132   2e-29
emb|CBI36037.3| unnamed protein product [Vitis vinifera]              132   2e-29

>ref|XP_003547332.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  138 bits (348), Expect = 4e-31
 Identities = 67/69 (97%), Positives = 68/69 (98%)
 Frame = +1

Query: 1   VTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSGGHGKLRVRRQNPI 180
           +TYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSGGHGKLR RRQNPI
Sbjct: 579 ITYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSGGHGKLRFRRQNPI 638

Query: 181 TGWVVSPLR 207
           TGWVVSPLR
Sbjct: 639 TGWVVSPLR 647


>ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355483603|gb|AES64806.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  136 bits (342), Expect = 2e-30
 Identities = 67/69 (97%), Positives = 68/69 (98%)
 Frame = +1

Query: 1   VTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSGGHGKLRVRRQNPI 180
           VTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSG HGKLRVRRQNPI
Sbjct: 571 VTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSGRHGKLRVRRQNPI 630

Query: 181 TGWVVSPLR 207
           TGWVVSPL+
Sbjct: 631 TGWVVSPLQ 639


>ref|XP_002515948.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544853|gb|EEF46368.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 706

 Score =  134 bits (338), Expect = 6e-30
 Identities = 67/74 (90%), Positives = 70/74 (94%)
 Frame = +1

Query: 1   VTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSGGHGKLRVRRQNPI 180
           VTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITY+VLERLQSG H KLRVRR+NPI
Sbjct: 425 VTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYSVLERLQSGSHRKLRVRRKNPI 484

Query: 181 TGWVVSPLR*Y*KQ 222
           TGWVVSPLR + KQ
Sbjct: 485 TGWVVSPLRYFLKQ 498


>ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containing protein At5g39710
           [Vitis vinifera]
          Length = 990

 Score =  132 bits (333), Expect = 2e-29
 Identities = 65/69 (94%), Positives = 67/69 (97%)
 Frame = +1

Query: 1   VTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSGGHGKLRVRRQNPI 180
           VTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSG H K+RVRR+NPI
Sbjct: 425 VTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSGSHQKVRVRRKNPI 484

Query: 181 TGWVVSPLR 207
           TGWVVSPLR
Sbjct: 485 TGWVVSPLR 493


>emb|CBI36037.3| unnamed protein product [Vitis vinifera]
          Length = 646

 Score =  132 bits (333), Expect = 2e-29
 Identities = 65/69 (94%), Positives = 67/69 (97%)
 Frame = +1

Query: 1   VTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSGGHGKLRVRRQNPI 180
           VTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSG H K+RVRR+NPI
Sbjct: 578 VTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSGSHQKVRVRRKNPI 637

Query: 181 TGWVVSPLR 207
           TGWVVSPLR
Sbjct: 638 TGWVVSPLR 646


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