BLASTX nr result

ID: Glycyrrhiza24_contig00031361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031361
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552402.1| PREDICTED: ATP-dependent helicase BRM-like [...   134   8e-30
ref|XP_003534554.1| PREDICTED: ATP-dependent helicase BRM-like [...   130   8e-29
ref|XP_003623999.1| ATP-dependent helicase BRM [Medicago truncat...   120   1e-25
ref|XP_003627563.1| ATP-dependent helicase BRM [Medicago truncat...   116   2e-24
ref|XP_003548671.1| PREDICTED: ATP-dependent helicase BRM-like [...   109   3e-22

>ref|XP_003552402.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2222

 Score =  134 bits (337), Expect = 8e-30
 Identities = 68/79 (86%), Positives = 73/79 (92%)
 Frame = -3

Query: 239 PEGNEAVLAYQAGLQGVFGNNNFSSPSAMQLPQQSRKFIDLAQHGSNQGQGIEQQMLNPV 60
           PEG+EA LAYQAGLQGVFG+NNF S S+MQLPQQSRKF+DLAQHGSNQ QG+EQQMLNPV
Sbjct: 69  PEGSEAFLAYQAGLQGVFGSNNFPS-SSMQLPQQSRKFVDLAQHGSNQVQGVEQQMLNPV 127

Query: 59  QQAYFQYALQPSQQKSALA 3
           Q AYFQYALQ SQQKSALA
Sbjct: 128 QAAYFQYALQASQQKSALA 146


>ref|XP_003534554.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2222

 Score =  130 bits (328), Expect = 8e-29
 Identities = 66/78 (84%), Positives = 71/78 (91%)
 Frame = -3

Query: 239 PEGNEAVLAYQAGLQGVFGNNNFSSPSAMQLPQQSRKFIDLAQHGSNQGQGIEQQMLNPV 60
           PEG+EA LAYQAGLQGVFG+NNF S S+MQLPQQSRKF+DLAQHGSNQ QG+EQQMLNP 
Sbjct: 69  PEGSEAFLAYQAGLQGVFGSNNFPS-SSMQLPQQSRKFVDLAQHGSNQIQGVEQQMLNPA 127

Query: 59  QQAYFQYALQPSQQKSAL 6
           Q AYFQYALQ SQQKSAL
Sbjct: 128 QAAYFQYALQASQQKSAL 145


>ref|XP_003623999.1| ATP-dependent helicase BRM [Medicago truncatula]
           gi|355499014|gb|AES80217.1| ATP-dependent helicase BRM
           [Medicago truncatula]
          Length = 2238

 Score =  120 bits (300), Expect = 1e-25
 Identities = 60/78 (76%), Positives = 66/78 (84%)
 Frame = -3

Query: 236 EGNEAVLAYQAGLQGVFGNNNFSSPSAMQLPQQSRKFIDLAQHGSNQGQGIEQQMLNPVQ 57
           EG+EAVLAYQAG QG+FGNNN+SS +AMQLP QSR F  LAQHG NQGQGIEQQ LNPV+
Sbjct: 67  EGSEAVLAYQAGHQGLFGNNNYSSSTAMQLPPQSRNFFALAQHGPNQGQGIEQQRLNPVR 126

Query: 56  QAYFQYALQPSQQKSALA 3
           QAY QYALQ  QQ+ ALA
Sbjct: 127 QAYSQYALQSFQQRPALA 144


>ref|XP_003627563.1| ATP-dependent helicase BRM [Medicago truncatula]
           gi|355521585|gb|AET02039.1| ATP-dependent helicase BRM
           [Medicago truncatula]
          Length = 2175

 Score =  116 bits (291), Expect = 2e-24
 Identities = 60/81 (74%), Positives = 66/81 (81%), Gaps = 6/81 (7%)
 Frame = -3

Query: 239 PEGNEAVLAYQAGLQGVFGNNNFSSPSAMQLPQQSRKFIDLAQHGSNQ-----GQGIE-Q 78
           PEGNEA LAYQAG QGVFG+NNF  P+AMQLPQQS KF++LAQHGSNQ     GQG E Q
Sbjct: 72  PEGNEAFLAYQAGRQGVFGSNNFQQPNAMQLPQQSGKFVNLAQHGSNQDGQLRGQGSEQQ 131

Query: 77  QMLNPVQQAYFQYALQPSQQK 15
           QM+NPVQQAY QYA Q +QQK
Sbjct: 132 QMINPVQQAYLQYAFQAAQQK 152


>ref|XP_003548671.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2229

 Score =  109 bits (272), Expect = 3e-22
 Identities = 58/83 (69%), Positives = 63/83 (75%), Gaps = 5/83 (6%)
 Frame = -3

Query: 239 PEGNEAVLAYQAGLQGVFGNNNFSSPSAMQLPQQSRKFIDLAQHGSNQ-----GQGIEQQ 75
           PEGNEA LAYQAG+QGVFG+NNFSSPSAMQLPQQ RK       GSNQ     GQG+EQQ
Sbjct: 69  PEGNEAFLAYQAGIQGVFGSNNFSSPSAMQLPQQPRKL----HLGSNQDIQLRGQGVEQQ 124

Query: 74  MLNPVQQAYFQYALQPSQQKSAL 6
           MLNPV QAY QYAL  +QQ+  L
Sbjct: 125 MLNPVHQAYLQYALHAAQQRPTL 147


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