BLASTX nr result

ID: Glycyrrhiza24_contig00031346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031346
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38123.1| unknown [Lotus japonicus]                              211   4e-53
gb|ACU22775.1| unknown [Glycine max]                                  206   2e-51
ref|XP_003519550.1| PREDICTED: DNA primase small subunit-like [G...   205   3e-51
ref|XP_003545171.1| PREDICTED: LOW QUALITY PROTEIN: DNA primase ...   204   8e-51
ref|XP_003600546.1| DNA primase small subunit [Medicago truncatu...   199   3e-49

>gb|AFK38123.1| unknown [Lotus japonicus]
          Length = 347

 Score =  211 bits (538), Expect = 4e-53
 Identities = 96/115 (83%), Positives = 104/115 (90%)
 Frame = -3

Query: 347 QMIPQQEPDFNPNYLKLYYGKLFPFADIYRWASYGNDGKHPGCDQSYFGRREFSFTLDND 168
           +MI  QE DFNPNYLKLYYGKLFPF DI+RW SYGNDGKHPGCD SYFGRREFSFTL+ND
Sbjct: 25  KMITDQELDFNPNYLKLYYGKLFPFTDIFRWMSYGNDGKHPGCDSSYFGRREFSFTLEND 84

Query: 167 VYLRYQSFNSAIELENSIREKCPFKIDIGAVYTVDPAKRHAYAQSDNNVFYPVER 3
           +YLR+QSFN+A+ELENSI+EK PFKIDIG VYTVDPAKRHAYAQ DN VF PVER
Sbjct: 85  IYLRFQSFNNALELENSIKEKSPFKIDIGPVYTVDPAKRHAYAQGDNKVFAPVER 139


>gb|ACU22775.1| unknown [Glycine max]
          Length = 242

 Score =  206 bits (523), Expect = 2e-51
 Identities = 97/115 (84%), Positives = 106/115 (92%), Gaps = 1/115 (0%)
 Frame = -3

Query: 344 MIPQQEPDFNPNYLKLYYGKLFPFADIYRWASYGNDGKHPGCDQSYFGRREFSFTLDNDV 165
           MIPQQEPDFN N+LKLYYGKLFPFAD+ RW SYGNDGKHPGCDQSY GRREFSFTL+NDV
Sbjct: 1   MIPQQEPDFNLNHLKLYYGKLFPFADLVRWVSYGNDGKHPGCDQSYIGRREFSFTLENDV 60

Query: 164 YLRYQSFNSAIELENSIREKCPFKIDIGAVYTVDPAKRHAYAQS-DNNVFYPVER 3
           YLR+QSF++A+ELENSI+EK P KIDIG VYTVDPAKR+AYAQS DNNVF PVER
Sbjct: 61  YLRFQSFHNALELENSIKEKTPVKIDIGPVYTVDPAKRNAYAQSGDNNVFAPVER 115


>ref|XP_003519550.1| PREDICTED: DNA primase small subunit-like [Glycine max]
          Length = 434

 Score =  205 bits (522), Expect = 3e-51
 Identities = 96/115 (83%), Positives = 106/115 (92%), Gaps = 1/115 (0%)
 Frame = -3

Query: 344 MIPQQEPDFNPNYLKLYYGKLFPFADIYRWASYGNDGKHPGCDQSYFGRREFSFTLDNDV 165
           MIPQQEPDFN N+LKLYYGKLFPFAD+ RW SYGNDGKHPGCDQSY GRREFSFTL+ND+
Sbjct: 1   MIPQQEPDFNLNHLKLYYGKLFPFADLVRWVSYGNDGKHPGCDQSYIGRREFSFTLENDI 60

Query: 164 YLRYQSFNSAIELENSIREKCPFKIDIGAVYTVDPAKRHAYAQS-DNNVFYPVER 3
           YLR+QSF++A+ELENSI+EK P KIDIG VYTVDPAKR+AYAQS DNNVF PVER
Sbjct: 61  YLRFQSFHNALELENSIKEKTPVKIDIGPVYTVDPAKRNAYAQSGDNNVFAPVER 115


>ref|XP_003545171.1| PREDICTED: LOW QUALITY PROTEIN: DNA primase small subunit-like
           [Glycine max]
          Length = 435

 Score =  204 bits (518), Expect = 8e-51
 Identities = 95/115 (82%), Positives = 104/115 (90%), Gaps = 1/115 (0%)
 Frame = -3

Query: 344 MIPQQEPDFNPNYLKLYYGKLFPFADIYRWASYGNDGKHPGCDQSYFGRREFSFTLDNDV 165
           MIP QEPDFN N+LKLYYGKLFPF D+ RW SYGNDGKHPGCDQSY GRREFSFTL+ND+
Sbjct: 1   MIPHQEPDFNLNHLKLYYGKLFPFVDLVRWVSYGNDGKHPGCDQSYIGRREFSFTLENDI 60

Query: 164 YLRYQSFNSAIELENSIREKCPFKIDIGAVYTVDPAKRHAYAQS-DNNVFYPVER 3
           YLR+QSF++A ELENSI+EKCP KIDIG VYTVDPAKR+AYAQS DNNVF PVER
Sbjct: 61  YLRFQSFHNAHELENSIKEKCPVKIDIGPVYTVDPAKRNAYAQSGDNNVFAPVER 115


>ref|XP_003600546.1| DNA primase small subunit [Medicago truncatula]
           gi|355489594|gb|AES70797.1| DNA primase small subunit
           [Medicago truncatula]
          Length = 433

 Score =  199 bits (505), Expect = 3e-49
 Identities = 89/114 (78%), Positives = 103/114 (90%)
 Frame = -3

Query: 344 MIPQQEPDFNPNYLKLYYGKLFPFADIYRWASYGNDGKHPGCDQSYFGRREFSFTLDNDV 165
           MIPQQ+ +F+ N LK YYGKLFP+ADI++W SYG+DGKHPGCDQSYFGRREFSFTL+ D 
Sbjct: 1   MIPQQDSEFDSNCLKPYYGKLFPYADIFKWMSYGHDGKHPGCDQSYFGRREFSFTLNGDF 60

Query: 164 YLRYQSFNSAIELENSIREKCPFKIDIGAVYTVDPAKRHAYAQSDNNVFYPVER 3
           YLR+QS+N+A+ELE +I+EKCP KIDIG VYTVDPAKRHAYAQSDNNVF PVER
Sbjct: 61  YLRFQSYNNALELEKAIKEKCPLKIDIGPVYTVDPAKRHAYAQSDNNVFTPVER 114


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