BLASTX nr result

ID: Glycyrrhiza24_contig00031345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031345
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516729.1| PREDICTED: uncharacterized protein LOC100792...   163   1e-38
ref|XP_003538656.1| PREDICTED: uncharacterized protein LOC100809...   149   3e-34
ref|XP_003630104.1| Transcription factor tfiiib component [Medic...    94   1e-17
ref|XP_003631592.1| PREDICTED: uncharacterized protein LOC100854...    57   2e-06
emb|CBI37684.3| unnamed protein product [Vitis vinifera]               57   2e-06

>ref|XP_003516729.1| PREDICTED: uncharacterized protein LOC100792788 [Glycine max]
          Length = 935

 Score =  163 bits (413), Expect = 1e-38
 Identities = 90/152 (59%), Positives = 105/152 (69%), Gaps = 1/152 (0%)
 Frame = +2

Query: 2   KVVIFESTTHSNFDFGKEQEVVSMEFELDPFSNVLLDPGTRNAHKFQPKIKPRPRVGNTP 181
           K+ I +S      +F K+QE VS EFELDPFSN+L +P  RN HKF+PKIKPRPR GN P
Sbjct: 208 KIAIIQSNFDLKSNFCKKQEGVSAEFELDPFSNILPNPVARNVHKFKPKIKPRPRAGNVP 267

Query: 182 AIASASSSVMMEKSVELPT-CTSEVXXXXXXXXXXXXLNQSTSVPSSSSEILRTTDLSNK 358
           AIAS SS+V MEKSVELPT CT+              +NQSTS+P  +SEILRTT+L  K
Sbjct: 268 AIASDSSNVRMEKSVELPTSCTNNFQSFLSCGDGSGGVNQSTSLPLPTSEILRTTELPKK 327

Query: 359 IDYMSSIIPFSEDNRSLSAVITSQPDSLNAML 454
            D  SS IPFSEDN+SL+A I SQ DS N ML
Sbjct: 328 FDDSSSSIPFSEDNKSLAAAIPSQLDSPNVML 359


>ref|XP_003538656.1| PREDICTED: uncharacterized protein LOC100809837 [Glycine max]
          Length = 710

 Score =  149 bits (375), Expect = 3e-34
 Identities = 85/137 (62%), Positives = 97/137 (70%), Gaps = 1/137 (0%)
 Frame = +2

Query: 47  GKEQEVVSMEFELDPFSNVLLDPGTRNAHKFQPKIKPRPRVGNTPAIASASSSVMMEKSV 226
           G   + VS EFELDPFSN+L  PG  N HKF+PKIKPRPRV N PAIAS SS+VMMEKSV
Sbjct: 215 GNTFQGVSAEFELDPFSNILPYPGAGNVHKFKPKIKPRPRVSNVPAIASDSSNVMMEKSV 274

Query: 227 ELPT-CTSEVXXXXXXXXXXXXLNQSTSVPSSSSEILRTTDLSNKIDYMSSIIPFSEDNR 403
           ELPT CT++             LNQS S+P  +SEILRTT+L +K D  SS I  SEDN+
Sbjct: 275 ELPTSCTNDFQFFQSCGDGSGGLNQSASLPLPTSEILRTTELPDKFDDTSSSI-LSEDNK 333

Query: 404 SLSAVITSQPDSLNAML 454
           SL+A I SQ DSLNAML
Sbjct: 334 SLAAAIPSQLDSLNAML 350


>ref|XP_003630104.1| Transcription factor tfiiib component [Medicago truncatula]
           gi|355524126|gb|AET04580.1| Transcription factor tfiiib
           component [Medicago truncatula]
          Length = 837

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 46/66 (69%), Positives = 53/66 (80%)
 Frame = +2

Query: 11  IFESTTHSNFDFGKEQEVVSMEFELDPFSNVLLDPGTRNAHKFQPKIKPRPRVGNTPAIA 190
           I ES  HS+F+FG+ +EV+S E ELDPFS+VL DPGT  A KFQPKIKPRPRV NTPA A
Sbjct: 141 ISESDLHSSFEFGEVREVLSAEIELDPFSDVLPDPGTGKAKKFQPKIKPRPRVSNTPATA 200

Query: 191 SASSSV 208
           SASS +
Sbjct: 201 SASSGI 206


>ref|XP_003631592.1| PREDICTED: uncharacterized protein LOC100854024 [Vitis vinifera]
          Length = 1053

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
 Frame = +2

Query: 71  MEFELDPFSNVLLDPGTRNAH---KFQPKIKPRPRVGNTPAIASASSSVMMEKSVELPTC 241
           M F+LDP  +VL +P   NA    KFQPK K RPR G + ++ S  S+   EK++   T 
Sbjct: 1   MGFDLDPLDDVLPEPAAINARAGGKFQPKAKARPRKGTSASVPSTISNATKEKTIRPTTT 60

Query: 242 TSE-VXXXXXXXXXXXXLNQSTSVPSSSSEILRTTDLSNKIDYMSSIIPFSEDNRSLSAV 418
            S+              LN +      +SEI  + D     + +   + F+++NRSL++V
Sbjct: 61  GSDTTQSLRPIDVIQNGLNDTVGSSLDTSEIGGSKDTLKDHEGLVGGVSFTDNNRSLASV 120


>emb|CBI37684.3| unnamed protein product [Vitis vinifera]
          Length = 992

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
 Frame = +2

Query: 71  MEFELDPFSNVLLDPGTRNAH---KFQPKIKPRPRVGNTPAIASASSSVMMEKSVELPTC 241
           M F+LDP  +VL +P   NA    KFQPK K RPR G + ++ S  S+   EK++   T 
Sbjct: 1   MGFDLDPLDDVLPEPAAINARAGGKFQPKAKARPRKGTSASVPSTISNATKEKTIRPTTT 60

Query: 242 TSE-VXXXXXXXXXXXXLNQSTSVPSSSSEILRTTDLSNKIDYMSSIIPFSEDNRSLSAV 418
            S+              LN +      +SEI  + D     + +   + F+++NRSL++V
Sbjct: 61  GSDTTQSLRPIDVIQNGLNDTVGSSLDTSEIGGSKDTLKDHEGLVGGVSFTDNNRSLASV 120


Top