BLASTX nr result

ID: Glycyrrhiza24_contig00031320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031320
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524107.1| PREDICTED: small RNA 2'-O-methyltransferase-...   219   2e-55
ref|XP_003532646.1| PREDICTED: small RNA 2'-O-methyltransferase-...   217   7e-55
ref|XP_002523181.1| conserved hypothetical protein [Ricinus comm...   164   9e-39
ref|XP_002300565.1| hypothetical protein POPTRDRAFT_177484 [Popu...   160   8e-38
ref|XP_004171716.1| PREDICTED: LOW QUALITY PROTEIN: small RNA 2'...   160   1e-37

>ref|XP_003524107.1| PREDICTED: small RNA 2'-O-methyltransferase-like [Glycine max]
          Length = 945

 Score =  219 bits (557), Expect = 2e-55
 Identities = 99/117 (84%), Positives = 110/117 (94%)
 Frame = +2

Query: 2    STPNFEYNVVLQRSNPPTQEQEELDEKTLLQSCKFRNHDHKFEWTREQFRQWASDLAARH 181
            STPNFEYNVVLQ+SNPPTQEQEE DEKTLLQSCKFRNHDHKFEWTREQF QWA DLAARH
Sbjct: 830  STPNFEYNVVLQKSNPPTQEQEESDEKTLLQSCKFRNHDHKFEWTREQFTQWACDLAARH 889

Query: 182  NYNVEFSGVGGAADVEPGFASQIAVFRREWRPEDDVHKHADIEHHYNVIWDWNSENK 352
            NYNVEFSGVGG+ADVEPG+ASQIAVF+R+W+ EDDV KHAD EHHY++IW+WNS+ +
Sbjct: 890  NYNVEFSGVGGSADVEPGYASQIAVFKRDWKLEDDVLKHAD-EHHYSIIWEWNSKKE 945


>ref|XP_003532646.1| PREDICTED: small RNA 2'-O-methyltransferase-like [Glycine max]
          Length = 945

 Score =  217 bits (553), Expect = 7e-55
 Identities = 98/117 (83%), Positives = 110/117 (94%)
 Frame = +2

Query: 2    STPNFEYNVVLQRSNPPTQEQEELDEKTLLQSCKFRNHDHKFEWTREQFRQWASDLAARH 181
            STPNFEYNVVLQ+S+PPTQEQEE DEKTLLQSCKFRNHDHKFEWTREQF QWASDLAARH
Sbjct: 830  STPNFEYNVVLQKSSPPTQEQEESDEKTLLQSCKFRNHDHKFEWTREQFTQWASDLAARH 889

Query: 182  NYNVEFSGVGGAADVEPGFASQIAVFRREWRPEDDVHKHADIEHHYNVIWDWNSENK 352
            NYNVEF GVGG+ADVEPG+ASQIAVF+R+W+ EDDV KHAD EHHY++IW+WNS+ +
Sbjct: 890  NYNVEFGGVGGSADVEPGYASQIAVFKRDWKLEDDVLKHAD-EHHYSIIWEWNSKKE 945


>ref|XP_002523181.1| conserved hypothetical protein [Ricinus communis]
            gi|223537588|gb|EEF39212.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 970

 Score =  164 bits (414), Expect = 9e-39
 Identities = 78/114 (68%), Positives = 94/114 (82%), Gaps = 1/114 (0%)
 Frame = +2

Query: 2    STPNFEYNVVLQRSNPPTQEQEELDEKTLLQSCKFRNHDHKFEWTREQFRQWASDLAARH 181
            STPN+EYNV+LQRS+   QE E+ DEKT  QSCKFRNHDH+FEWTREQF  WA++LA +H
Sbjct: 850  STPNYEYNVILQRSSLTNQE-EDPDEKTESQSCKFRNHDHRFEWTREQFNSWATELARQH 908

Query: 182  NYNVEFSGVGGAADVEPGFASQIAVFRREWRP-EDDVHKHADIEHHYNVIWDWN 340
            NYNVEFSGVGG+ADVEPGFASQIAVF RE  P EDD+ ++   E++  V+W+WN
Sbjct: 909  NYNVEFSGVGGSADVEPGFASQIAVFTREILPQEDDLSENNKSENNCKVVWEWN 962


>ref|XP_002300565.1| hypothetical protein POPTRDRAFT_177484 [Populus trichocarpa]
            gi|222847823|gb|EEE85370.1| hypothetical protein
            POPTRDRAFT_177484 [Populus trichocarpa]
          Length = 926

 Score =  160 bits (406), Expect = 8e-38
 Identities = 77/113 (68%), Positives = 90/113 (79%), Gaps = 1/113 (0%)
 Frame = +2

Query: 2    STPNFEYNVVLQRSNPPTQEQEELDEKTLLQSCKFRNHDHKFEWTREQFRQWASDLAARH 181
            STPN+EYNV+LQ S+P TQE E+ DEK+  QSCKFRNHDHKFEWTREQF  WASDLA RH
Sbjct: 815  STPNYEYNVILQGSSPTTQE-EDPDEKSQSQSCKFRNHDHKFEWTREQFNHWASDLAKRH 873

Query: 182  NYNVEFSGVGGAADVEPGFASQIAVFRRE-WRPEDDVHKHADIEHHYNVIWDW 337
            +Y+VEFSGVGG+ DVEPGFASQIAVF++E    EDD+    +   H  VIW+W
Sbjct: 874  HYSVEFSGVGGSGDVEPGFASQIAVFKQESLLDEDDLPTQENSSEHCKVIWEW 926


>ref|XP_004171716.1| PREDICTED: LOW QUALITY PROTEIN: small RNA 2'-O-methyltransferase-like
            [Cucumis sativus]
          Length = 816

 Score =  160 bits (405), Expect = 1e-37
 Identities = 76/118 (64%), Positives = 90/118 (76%), Gaps = 1/118 (0%)
 Frame = +2

Query: 2    STPNFEYNVVLQRSNPPTQEQEELDEKTLLQSCKFRNHDHKFEWTREQFRQWASDLAARH 181
            STPN+EYNV+LQ SN  +QE +  D+KT LQSCKFRNHDHKFEWTREQF  WA DLA RH
Sbjct: 700  STPNYEYNVILQGSNLSSQEGDS-DDKTQLQSCKFRNHDHKFEWTREQFNHWARDLATRH 758

Query: 182  NYNVEFSGVGGAADVEPGFASQIAVFRR-EWRPEDDVHKHADIEHHYNVIWDWNSENK 352
            NY+VEFSGVGG   +EPG+ASQIA+FRR E R    +   A+  + Y +IW+WNS NK
Sbjct: 759  NYSVEFSGVGGLGHMEPGYASQIAIFRRSETRHVHPIDDKAEPAYKYQIIWEWNSRNK 816


Top