BLASTX nr result

ID: Glycyrrhiza24_contig00031317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031317
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552811.1| PREDICTED: U3 small nucleolar RNA-associated...   146   1e-33
ref|XP_003601650.1| Small subunit processome component-like prot...   138   4e-31
ref|XP_002263943.2| PREDICTED: uncharacterized protein LOC100255...   120   1e-25
ref|XP_002869353.1| hypothetical protein ARALYDRAFT_353720 [Arab...   120   1e-25
emb|CBI17281.3| unnamed protein product [Vitis vinifera]              120   1e-25

>ref|XP_003552811.1| PREDICTED: U3 small nucleolar RNA-associated protein 20-like [Glycine
            max]
          Length = 2653

 Score =  146 bits (369), Expect = 1e-33
 Identities = 74/83 (89%), Positives = 79/83 (95%)
 Frame = -3

Query: 249  KIDYCLGDLLSVIENDILGYVAEQKEVEKIAAKMKETRRKKSFESLKLVAQNITFKSYAL 70
            KIDYCL DLLSVIENDILG VAEQKEVEKIA+KMKETRRKKSFESLKLVAQN+TFKSYAL
Sbjct: 1841 KIDYCLEDLLSVIENDILGDVAEQKEVEKIASKMKETRRKKSFESLKLVAQNVTFKSYAL 1900

Query: 69   KLLAPVTTHLQKQVTPNVKGKLK 1
            KLLAPVT HL+K +TPNVKGKL+
Sbjct: 1901 KLLAPVTAHLKKHITPNVKGKLE 1923


>ref|XP_003601650.1| Small subunit processome component-like protein [Medicago truncatula]
            gi|355490698|gb|AES71901.1| Small subunit processome
            component-like protein [Medicago truncatula]
          Length = 2733

 Score =  138 bits (348), Expect = 4e-31
 Identities = 70/83 (84%), Positives = 76/83 (91%)
 Frame = -3

Query: 249  KIDYCLGDLLSVIENDILGYVAEQKEVEKIAAKMKETRRKKSFESLKLVAQNITFKSYAL 70
            KIDYCLGDLLSVIENDILG VAEQKEVEKIA+KMKET++K SFESLK VAQN+TFKS AL
Sbjct: 1873 KIDYCLGDLLSVIENDILGVVAEQKEVEKIASKMKETKKKTSFESLKFVAQNVTFKSCAL 1932

Query: 69   KLLAPVTTHLQKQVTPNVKGKLK 1
            KLLAP+T HLQK VT NVKGKL+
Sbjct: 1933 KLLAPMTAHLQKHVTQNVKGKLE 1955


>ref|XP_002263943.2| PREDICTED: uncharacterized protein LOC100255444 [Vitis vinifera]
          Length = 3196

 Score =  120 bits (300), Expect = 1e-25
 Identities = 58/83 (69%), Positives = 73/83 (87%)
 Frame = -3

Query: 249  KIDYCLGDLLSVIENDILGYVAEQKEVEKIAAKMKETRRKKSFESLKLVAQNITFKSYAL 70
            K+DYCL DLLS+++NDILG VAE+KEVEKIA+KMKETR++KSFE+LKL+AQ+I FKS+AL
Sbjct: 1359 KLDYCLEDLLSIVKNDILGDVAEEKEVEKIASKMKETRKRKSFETLKLIAQSIMFKSHAL 1418

Query: 69   KLLAPVTTHLQKQVTPNVKGKLK 1
            KLL+PV  HLQ  +TP VK  L+
Sbjct: 1419 KLLSPVIAHLQNHLTPKVKLNLE 1441


>ref|XP_002869353.1| hypothetical protein ARALYDRAFT_353720 [Arabidopsis lyrata subsp.
            lyrata] gi|297315189|gb|EFH45612.1| hypothetical protein
            ARALYDRAFT_353720 [Arabidopsis lyrata subsp. lyrata]
          Length = 2855

 Score =  120 bits (300), Expect = 1e-25
 Identities = 55/83 (66%), Positives = 73/83 (87%)
 Frame = -3

Query: 249  KIDYCLGDLLSVIENDILGYVAEQKEVEKIAAKMKETRRKKSFESLKLVAQNITFKSYAL 70
            K+D+CLGDLL+V+E DILG VAEQKEVEK A+KMKETR++KSFE+LKL+A+N+TF+S+ L
Sbjct: 1785 KLDHCLGDLLAVVETDILGEVAEQKEVEKFASKMKETRKRKSFETLKLIAENVTFRSHGL 1844

Query: 69   KLLAPVTTHLQKQVTPNVKGKLK 1
            KLL+PVT  LQ+ +TP +K  L+
Sbjct: 1845 KLLSPVTAQLQRHLTPKIKTNLE 1867


>emb|CBI17281.3| unnamed protein product [Vitis vinifera]
          Length = 2629

 Score =  120 bits (300), Expect = 1e-25
 Identities = 58/83 (69%), Positives = 73/83 (87%)
 Frame = -3

Query: 249  KIDYCLGDLLSVIENDILGYVAEQKEVEKIAAKMKETRRKKSFESLKLVAQNITFKSYAL 70
            K+DYCL DLLS+++NDILG VAE+KEVEKIA+KMKETR++KSFE+LKL+AQ+I FKS+AL
Sbjct: 1816 KLDYCLEDLLSIVKNDILGDVAEEKEVEKIASKMKETRKRKSFETLKLIAQSIMFKSHAL 1875

Query: 69   KLLAPVTTHLQKQVTPNVKGKLK 1
            KLL+PV  HLQ  +TP VK  L+
Sbjct: 1876 KLLSPVIAHLQNHLTPKVKLNLE 1898


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