BLASTX nr result
ID: Glycyrrhiza24_contig00031283
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00031283
(272 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003525932.1| PREDICTED: pentatricopeptide repeat-containi... 156 1e-36
ref|XP_004170773.1| PREDICTED: pentatricopeptide repeat-containi... 144 7e-33
ref|XP_002282063.1| PREDICTED: pentatricopeptide repeat-containi... 143 2e-32
emb|CAN65024.1| hypothetical protein VITISV_026273 [Vitis vinifera] 143 2e-32
ref|XP_004152427.1| PREDICTED: pentatricopeptide repeat-containi... 142 2e-32
>ref|XP_003525932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 526
Score = 156 bits (395), Expect = 1e-36
Identities = 76/90 (84%), Positives = 85/90 (94%)
Frame = +2
Query: 2 FDKTTEKDVVLWTAMIDGYGKMGNVESARELFEEMPERNAVSWSAMMAAYSRVSDFKEVL 181
FD+T+ KDVVL TAM+DGYGKMGNV+SARE+F++MPERNAVSWSAMMAAYSRVSDFKEVL
Sbjct: 168 FDETSYKDVVLGTAMVDGYGKMGNVKSAREVFDKMPERNAVSWSAMMAAYSRVSDFKEVL 227
Query: 182 ALFVEMQSEGVRPNDSILVTVLTACAHLGA 271
ALF EMQ+EG PN+SILVTVLTACAHLGA
Sbjct: 228 ALFTEMQNEGTEPNESILVTVLTACAHLGA 257
Score = 63.5 bits (153), Expect = 2e-08
Identities = 31/82 (37%), Positives = 52/82 (63%)
Frame = +2
Query: 17 EKDVVLWTAMIDGYGKMGNVESARELFEEMPERNAVSWSAMMAAYSRVSDFKEVLALFVE 196
E + +L TA++D Y K G VESA +F+ + +++A +W+AM++ + D + L LF +
Sbjct: 274 ESNPILATALVDMYSKCGCVESALSVFDCIVDKDAGAWNAMISGEALNGDAGKSLQLFRQ 333
Query: 197 MQSEGVRPNDSILVTVLTACAH 262
M + +PN++ V VLTAC H
Sbjct: 334 MAASRTKPNETTFVAVLTACTH 355
>ref|XP_004170773.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 487
Score = 144 bits (363), Expect = 7e-33
Identities = 65/90 (72%), Positives = 81/90 (90%)
Frame = +2
Query: 2 FDKTTEKDVVLWTAMIDGYGKMGNVESARELFEEMPERNAVSWSAMMAAYSRVSDFKEVL 181
FDK++ KDVV+WT M+DGYGK+G++ESAR LF+EMPERN +SWSAMMAAYSRVSDF+EVL
Sbjct: 169 FDKSSGKDVVVWTVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVL 228
Query: 182 ALFVEMQSEGVRPNDSILVTVLTACAHLGA 271
LF +MQ + + PNDS++V+VLTACAHLGA
Sbjct: 229 CLFRQMQKKNIVPNDSVIVSVLTACAHLGA 258
Score = 62.0 bits (149), Expect = 5e-08
Identities = 27/82 (32%), Positives = 52/82 (63%)
Frame = +2
Query: 17 EKDVVLWTAMIDGYGKMGNVESARELFEEMPERNAVSWSAMMAAYSRVSDFKEVLALFVE 196
+ + +L TA++D Y K G +ESA E+FE + ++A +W+AM++ ++ + + L LF +
Sbjct: 275 DSNPILATALVDMYSKCGYIESALEVFEGISNKDAGAWNAMISGFAMTGNVVKSLELFDK 334
Query: 197 MQSEGVRPNDSILVTVLTACAH 262
M + G + ++ V++L AC H
Sbjct: 335 MIASGTQATEATFVSILAACTH 356
>ref|XP_002282063.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 533
Score = 143 bits (360), Expect = 2e-32
Identities = 68/90 (75%), Positives = 77/90 (85%)
Frame = +2
Query: 2 FDKTTEKDVVLWTAMIDGYGKMGNVESARELFEEMPERNAVSWSAMMAAYSRVSDFKEVL 181
FD+ +DVVLWTAMIDGYGKMG+VE AR LFE+MPERNA+SWSA+MAAYSRV DFKEVL
Sbjct: 172 FDRIPNRDVVLWTAMIDGYGKMGDVEHARILFEDMPERNAISWSAVMAAYSRVGDFKEVL 231
Query: 182 ALFVEMQSEGVRPNDSILVTVLTACAHLGA 271
LF MQ G PN+S+LV+VLTACAHLGA
Sbjct: 232 CLFRRMQEAGTMPNESVLVSVLTACAHLGA 261
Score = 65.9 bits (159), Expect = 3e-09
Identities = 32/82 (39%), Positives = 51/82 (62%)
Frame = +2
Query: 17 EKDVVLWTAMIDGYGKMGNVESARELFEEMPERNAVSWSAMMAAYSRVSDFKEVLALFVE 196
+ + +L TA++D Y K G VESA F+ +P ++A +W+AM++ + D + L LF +
Sbjct: 278 DSNPILATALVDMYSKCGCVESALSTFQGIPNKDAGAWNAMISGVAMNGDAWKSLELFNK 337
Query: 197 MQSEGVRPNDSILVTVLTACAH 262
M S G +P ++ V VLTAC H
Sbjct: 338 MISNGTQPTETTFVAVLTACTH 359
>emb|CAN65024.1| hypothetical protein VITISV_026273 [Vitis vinifera]
Length = 805
Score = 143 bits (360), Expect = 2e-32
Identities = 68/90 (75%), Positives = 77/90 (85%)
Frame = +2
Query: 2 FDKTTEKDVVLWTAMIDGYGKMGNVESARELFEEMPERNAVSWSAMMAAYSRVSDFKEVL 181
FD+ +DVVLWTAMIDGYGKMG+VE AR LFE+MPERNA+SWSA+MAAYSRV DFKEVL
Sbjct: 444 FDRIPNRDVVLWTAMIDGYGKMGDVEHARILFEDMPERNAISWSAVMAAYSRVGDFKEVL 503
Query: 182 ALFVEMQSEGVRPNDSILVTVLTACAHLGA 271
LF MQ G PN+S+LV+VLTACAHLGA
Sbjct: 504 CLFRRMQEAGTMPNESVLVSVLTACAHLGA 533
Score = 65.9 bits (159), Expect = 3e-09
Identities = 32/82 (39%), Positives = 51/82 (62%)
Frame = +2
Query: 17 EKDVVLWTAMIDGYGKMGNVESARELFEEMPERNAVSWSAMMAAYSRVSDFKEVLALFVE 196
+ + +L TA++D Y K G VESA F+ +P ++A +W+AM++ + D + L LF +
Sbjct: 550 DSNPILATALVDMYSKCGCVESALSTFQGIPNKDAGAWNAMISGVAMNGDAWKSLELFNK 609
Query: 197 MQSEGVRPNDSILVTVLTACAH 262
M S G +P ++ V VLTAC H
Sbjct: 610 MISNGTQPTETTFVAVLTACTH 631
>ref|XP_004152427.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 528
Score = 142 bits (359), Expect = 2e-32
Identities = 64/90 (71%), Positives = 80/90 (88%)
Frame = +2
Query: 2 FDKTTEKDVVLWTAMIDGYGKMGNVESARELFEEMPERNAVSWSAMMAAYSRVSDFKEVL 181
FDK++ KDVV+WT M+DGYGK+G++ESAR LF+EMPERN +SWSAMMAAYSRVSDF+EVL
Sbjct: 169 FDKSSGKDVVVWTVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVL 228
Query: 182 ALFVEMQSEGVRPNDSILVTVLTACAHLGA 271
LF +MQ + + PNDS++ +VLTACAHLGA
Sbjct: 229 CLFRQMQKKNIVPNDSVIASVLTACAHLGA 258
Score = 62.0 bits (149), Expect = 5e-08
Identities = 27/82 (32%), Positives = 52/82 (63%)
Frame = +2
Query: 17 EKDVVLWTAMIDGYGKMGNVESARELFEEMPERNAVSWSAMMAAYSRVSDFKEVLALFVE 196
+ + +L TA++D Y K G +ESA E+FE + ++A +W+AM++ ++ + + L LF +
Sbjct: 275 DSNPILATALVDMYSKCGYIESALEVFEGISNKDAGAWNAMISGFAMTGNVVKSLELFDK 334
Query: 197 MQSEGVRPNDSILVTVLTACAH 262
M + G + ++ V++L AC H
Sbjct: 335 MIASGTQATEATFVSILAACTH 356