BLASTX nr result

ID: Glycyrrhiza24_contig00031272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031272
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containi...    67   2e-09
ref|XP_003613018.1| Pentatricopeptide repeat-containing protein ...    65   7e-09

>ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 30/36 (83%), Positives = 33/36 (91%)
 Frame = -2

Query: 390 AKRGYVDQCSDLLNIMEKNGCRLHSETHSMLDQELN 283
           AK GYVDQCS+LLN+MEKNGCRLH ET+SML QELN
Sbjct: 855 AKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQELN 890


>ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355514353|gb|AES95976.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 894

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 27/37 (72%), Positives = 33/37 (89%)
 Frame = -2

Query: 387 KRGYVDQCSDLLNIMEKNGCRLHSETHSMLDQELNGT 277
           ++GYVD+CS L +IMEK GCRLHS+TH+ML QELNGT
Sbjct: 858 RKGYVDECSQLRDIMEKTGCRLHSDTHTMLSQELNGT 894


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