BLASTX nr result
ID: Glycyrrhiza24_contig00031264
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00031264
(388 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containi... 214 4e-54
ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containi... 202 2e-50
emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera] 200 1e-49
ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containi... 172 2e-41
ref|XP_002305373.1| predicted protein [Populus trichocarpa] gi|2... 169 2e-40
>ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Glycine max]
Length = 666
Score = 214 bits (546), Expect = 4e-54
Identities = 106/129 (82%), Positives = 119/129 (92%)
Frame = -2
Query: 387 TWTTLINGYILNGDARSALMLCRIMQREGVKPNSVSMASLLSACGTLVSLKHGKCLHAWA 208
TWTTLINGYILNGDARSALMLC +MQ EGVKPNSVS+ASLLSACG+LV L HGKCLHAWA
Sbjct: 282 TWTTLINGYILNGDARSALMLCGMMQCEGVKPNSVSIASLLSACGSLVYLNHGKCLHAWA 341
Query: 207 IRQRLDSEVTVETALIDMYAKCNNGDLSYIVFMKTSRKRTAPWNAVLSGFILNGLARKAI 28
IRQ+++SEV VETALI+MYAKCN G+LSY VFM TS+KRTAPWNA+LSGFI N LAR+AI
Sbjct: 342 IRQKIESEVIVETALINMYAKCNCGNLSYKVFMGTSKKRTAPWNALLSGFIQNRLAREAI 401
Query: 27 QLFKQMLVE 1
+LFKQMLV+
Sbjct: 402 ELFKQMLVK 410
Score = 82.0 bits (201), Expect = 4e-14
Identities = 42/129 (32%), Positives = 68/129 (52%)
Frame = -2
Query: 387 TWTTLINGYILNGDARSALMLCRIMQREGVKPNSVSMASLLSACGTLVSLKHGKCLHAWA 208
+W T+INGY N A A+ + M GV+P+ ++ S+L ACG L +++ G+ +H
Sbjct: 181 SWNTMINGYFRNNCAEDAVNVYGRMMDVGVEPDCATVVSVLPACGLLKNVELGREVHTLV 240
Query: 207 IRQRLDSEVTVETALIDMYAKCNNGDLSYIVFMKTSRKRTAPWNAVLSGFILNGLARKAI 28
+ + V AL+DMY KC ++++ K W +++G+ILNG AR A+
Sbjct: 241 QEKGFWGNIVVRNALVDMYVKCGQMKEAWLLAKGMDDKDVVTWTTLINGYILNGDARSAL 300
Query: 27 QLFKQMLVE 1
L M E
Sbjct: 301 MLCGMMQCE 309
Score = 67.0 bits (162), Expect = 1e-09
Identities = 37/128 (28%), Positives = 69/128 (53%), Gaps = 2/128 (1%)
Frame = -2
Query: 384 WTTLINGYILNGDARSALMLCRIMQREGVKPNSVSMASLLSACGTLVSLKHGKCLHAWAI 205
W L++G+I N AR A+ L + M + V+P+ + SLL A L L+ +H + I
Sbjct: 384 WNALLSGFIQNRLAREAIELFKQMLVKDVQPDHATFNSLLPAYAILADLQQAMNIHCYLI 443
Query: 204 RQRLDSEVTVETALIDMYAKCNNGDLSYIVF--MKTSRKRTAPWNAVLSGFILNGLARKA 31
R + V + L+D+Y+KC + ++ +F + K W+A+++ + +G + A
Sbjct: 444 RSGFLYRLEVASILVDIYSKCGSLGYAHQIFNIISLKDKDIIIWSAIIAAYGKHGHGKMA 503
Query: 30 IQLFKQML 7
++LF QM+
Sbjct: 504 VKLFNQMV 511
>ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera] gi|296082987|emb|CBI22288.3| unnamed
protein product [Vitis vinifera]
Length = 676
Score = 202 bits (514), Expect = 2e-50
Identities = 95/129 (73%), Positives = 117/129 (90%)
Frame = -2
Query: 387 TWTTLINGYILNGDARSALMLCRIMQREGVKPNSVSMASLLSACGTLVSLKHGKCLHAWA 208
+WTT++NGYILNGDARSAL+LC++MQ E VKPN V++AS+LSAC +L SLKHG+CLH WA
Sbjct: 292 SWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWA 351
Query: 207 IRQRLDSEVTVETALIDMYAKCNNGDLSYIVFMKTSRKRTAPWNAVLSGFILNGLARKAI 28
IRQ+L+SEV VETALIDMYAKCNN +LS+ VF KTS++RTAPWNA++SG I NGL+RKAI
Sbjct: 352 IRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAI 411
Query: 27 QLFKQMLVE 1
+LFKQML+E
Sbjct: 412 ELFKQMLME 420
Score = 97.1 bits (240), Expect = 1e-18
Identities = 46/129 (35%), Positives = 78/129 (60%)
Frame = -2
Query: 387 TWTTLINGYILNGDARSALMLCRIMQREGVKPNSVSMASLLSACGTLVSLKHGKCLHAWA 208
+W T+INGY NG + ALM+ M +G++P+ ++ S+L C L L+ G+ +HA
Sbjct: 191 SWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALV 250
Query: 207 IRQRLDSEVTVETALIDMYAKCNNGDLSYIVFMKTSRKRTAPWNAVLSGFILNGLARKAI 28
+ L +++V +L+DMYAKC N D + ++F + ++ W +++G+ILNG AR A+
Sbjct: 251 EVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSAL 310
Query: 27 QLFKQMLVE 1
L + M E
Sbjct: 311 LLCQMMQFE 319
Score = 81.3 bits (199), Expect = 8e-14
Identities = 44/128 (34%), Positives = 72/128 (56%), Gaps = 2/128 (1%)
Frame = -2
Query: 384 WTTLINGYILNGDARSALMLCRIMQREGVKPNSVSMASLLSACGTLVSLKHGKCLHAWAI 205
W +I+G I NG +R A+ L + M E V PN ++ SLL A L L+ + +H + I
Sbjct: 394 WNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLI 453
Query: 204 RQRLDSEVTVETALIDMYAKCNNGDLSYIVF--MKTSRKRTAPWNAVLSGFILNGLARKA 31
R S + V T LID+Y+KC + + ++ +F + K W+A+++G+ ++G A
Sbjct: 454 RSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETA 513
Query: 30 IQLFKQML 7
I LF QM+
Sbjct: 514 ISLFDQMV 521
Score = 61.6 bits (148), Expect = 6e-08
Identities = 33/128 (25%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
Frame = -2
Query: 387 TWTTLINGYILNGDARSALMLCRIMQREGVK-PNSVSMASLLSACGTLVSLKHGKCLHAW 211
+W +I Y +G + AL L M G + P++ + ++ ACG + + G +HA
Sbjct: 89 SWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHAR 148
Query: 210 AIRQRLDSEVTVETALIDMYAKCNNGDLSYIVFMKTSRKRTAPWNAVLSGFILNGLARKA 31
+ DS+ V+ +L+ MY C +++ VF + WN +++G+ NG ++A
Sbjct: 149 TVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEA 208
Query: 30 IQLFKQML 7
+ +F M+
Sbjct: 209 LMVFDWMI 216
>emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 200 bits (508), Expect = 1e-49
Identities = 94/129 (72%), Positives = 116/129 (89%)
Frame = -2
Query: 387 TWTTLINGYILNGDARSALMLCRIMQREGVKPNSVSMASLLSACGTLVSLKHGKCLHAWA 208
+WTT++NGYILNGDARSAL+LC++MQ E VKPN V++AS+LSAC +L SLKHG+CLH WA
Sbjct: 292 SWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWA 351
Query: 207 IRQRLDSEVTVETALIDMYAKCNNGDLSYIVFMKTSRKRTAPWNAVLSGFILNGLARKAI 28
IRQ+L+SEV VETALIDMYAKCNN +LS+ VF K S++RTAPWNA++SG I NGL+RKAI
Sbjct: 352 IRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAI 411
Query: 27 QLFKQMLVE 1
+LFKQML+E
Sbjct: 412 ELFKQMLME 420
Score = 97.1 bits (240), Expect = 1e-18
Identities = 46/129 (35%), Positives = 78/129 (60%)
Frame = -2
Query: 387 TWTTLINGYILNGDARSALMLCRIMQREGVKPNSVSMASLLSACGTLVSLKHGKCLHAWA 208
+W T+INGY NG + ALM+ M +G++P+ ++ S+L C L L+ G+ +HA
Sbjct: 191 SWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALV 250
Query: 207 IRQRLDSEVTVETALIDMYAKCNNGDLSYIVFMKTSRKRTAPWNAVLSGFILNGLARKAI 28
+ L +++V +L+DMYAKC N D + ++F + ++ W +++G+ILNG AR A+
Sbjct: 251 EVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSAL 310
Query: 27 QLFKQMLVE 1
L + M E
Sbjct: 311 LLCQMMQFE 319
Score = 81.3 bits (199), Expect = 8e-14
Identities = 44/128 (34%), Positives = 72/128 (56%), Gaps = 2/128 (1%)
Frame = -2
Query: 384 WTTLINGYILNGDARSALMLCRIMQREGVKPNSVSMASLLSACGTLVSLKHGKCLHAWAI 205
W +I+G I NG +R A+ L + M E V PN ++ SLL A L L+ + +H + I
Sbjct: 394 WNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLI 453
Query: 204 RQRLDSEVTVETALIDMYAKCNNGDLSYIVF--MKTSRKRTAPWNAVLSGFILNGLARKA 31
R S + V T LID+Y+KC + + ++ +F + K W+A+++G+ ++G A
Sbjct: 454 RSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETA 513
Query: 30 IQLFKQML 7
I LF QM+
Sbjct: 514 ISLFDQMV 521
Score = 61.6 bits (148), Expect = 6e-08
Identities = 33/128 (25%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
Frame = -2
Query: 387 TWTTLINGYILNGDARSALMLCRIMQREGVK-PNSVSMASLLSACGTLVSLKHGKCLHAW 211
+W +I Y +G + AL L M G + P++ + ++ ACG + + G +HA
Sbjct: 89 SWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHAR 148
Query: 210 AIRQRLDSEVTVETALIDMYAKCNNGDLSYIVFMKTSRKRTAPWNAVLSGFILNGLARKA 31
+ DS+ V+ +L+ MY C +++ VF + WN +++G+ NG ++A
Sbjct: 149 TVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEA 208
Query: 30 IQLFKQML 7
+ +F M+
Sbjct: 209 LMVFDWMI 216
>ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 787
Score = 172 bits (437), Expect = 2e-41
Identities = 84/129 (65%), Positives = 103/129 (79%)
Frame = -2
Query: 387 TWTTLINGYILNGDARSALMLCRIMQREGVKPNSVSMASLLSACGTLVSLKHGKCLHAWA 208
TWT++INGYI+NG+A+SAL LC MQ +GV PN+V++ASLLSAC +L LK GK LHAW
Sbjct: 353 TWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACASLCCLKQGKSLHAWV 412
Query: 207 IRQRLDSEVTVETALIDMYAKCNNGDLSYIVFMKTSRKRTAPWNAVLSGFILNGLARKAI 28
+R++LDS+V V TALIDMYAKCN S+ VF KTS KRT PWNA+LSG I N LAR+A+
Sbjct: 413 MRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKRTVPWNALLSGLIHNELAREAV 472
Query: 27 QLFKQMLVE 1
LFK ML+E
Sbjct: 473 GLFKSMLIE 481
Score = 88.2 bits (217), Expect = 6e-16
Identities = 42/129 (32%), Positives = 73/129 (56%)
Frame = -2
Query: 387 TWTTLINGYILNGDARSALMLCRIMQREGVKPNSVSMASLLSACGTLVSLKHGKCLHAWA 208
+W T+I+G+ NG AL + M V+P+S ++ S L +CG L L+ G +H
Sbjct: 252 SWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLKELELGIKVHKLV 311
Query: 207 IRQRLDSEVTVETALIDMYAKCNNGDLSYIVFMKTSRKRTAPWNAVLSGFILNGLARKAI 28
+ L ++ V AL+DMY++C D + +VF +T K W ++++G+I+NG A+ A+
Sbjct: 312 QKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAETKEKDVITWTSMINGYIMNGNAKSAL 371
Query: 27 QLFKQMLVE 1
L M ++
Sbjct: 372 ALCPAMQLD 380
Score = 74.7 bits (182), Expect = 7e-12
Identities = 42/128 (32%), Positives = 70/128 (54%), Gaps = 2/128 (1%)
Frame = -2
Query: 384 WTTLINGYILNGDARSALMLCRIMQREGVKPNSVSMASLLSACGTLVSLKHGKCLHAWAI 205
W L++G I N AR A+ L + M E V+ N + S++ A L LK LH++ +
Sbjct: 455 WNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLV 514
Query: 204 RQRLDSEVTVETALIDMYAKCNNGDLSYIVF--MKTSRKRTAPWNAVLSGFILNGLARKA 31
R S++ V T LIDMY+KC + D ++ +F + K W+ +++G+ ++G A
Sbjct: 515 RSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETA 574
Query: 30 IQLFKQML 7
+ LF QM+
Sbjct: 575 VLLFNQMV 582
Score = 56.2 bits (134), Expect = 3e-06
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 1/127 (0%)
Frame = -2
Query: 384 WTTLINGYILNGDARSALMLCRIMQREG-VKPNSVSMASLLSACGTLVSLKHGKCLHAWA 208
W +I Y+ G AL + M G P+ + ++ AC + L G +H A
Sbjct: 151 WNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHGRA 210
Query: 207 IRQRLDSEVTVETALIDMYAKCNNGDLSYIVFMKTSRKRTAPWNAVLSGFILNGLARKAI 28
+ S + V+ +L+ MY C L+ VF ++ WN ++SG+ NG +A+
Sbjct: 211 LVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEAL 270
Query: 27 QLFKQML 7
+F M+
Sbjct: 271 AVFNSMM 277
>ref|XP_002305373.1| predicted protein [Populus trichocarpa] gi|222848337|gb|EEE85884.1|
predicted protein [Populus trichocarpa]
Length = 676
Score = 169 bits (428), Expect = 2e-40
Identities = 82/129 (63%), Positives = 106/129 (82%)
Frame = -2
Query: 387 TWTTLINGYILNGDARSALMLCRIMQREGVKPNSVSMASLLSACGTLVSLKHGKCLHAWA 208
+WT++INGYILNGDA+SAL L +IMQ EG++PNSV++A +L AC +L +LK G+CLH W
Sbjct: 290 SWTSMINGYILNGDAKSALSLFKIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWV 349
Query: 207 IRQRLDSEVTVETALIDMYAKCNNGDLSYIVFMKTSRKRTAPWNAVLSGFILNGLARKAI 28
++QRL SEV VET+LIDMYAKCN LS+ VF +TSRK+T PWNA+LSG + N LA +AI
Sbjct: 350 MKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNKLATEAI 409
Query: 27 QLFKQMLVE 1
LFK+ML+E
Sbjct: 410 GLFKKMLME 418
Score = 96.3 bits (238), Expect = 2e-18
Identities = 49/129 (37%), Positives = 79/129 (61%)
Frame = -2
Query: 387 TWTTLINGYILNGDARSALMLCRIMQREGVKPNSVSMASLLSACGTLVSLKHGKCLHAWA 208
+W T+INGY NG A +AL++ M GV+ + S+ S+L ACG L L+ G+ +H
Sbjct: 190 SWNTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHG-L 248
Query: 207 IRQRLDSEVTVETALIDMYAKCNNGDLSYIVFMKTSRKRTAPWNAVLSGFILNGLARKAI 28
+ +++ + V AL+DMYAKC + D + +VF + W ++++G+ILNG A+ A+
Sbjct: 249 VEEKVLGKKIVSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSAL 308
Query: 27 QLFKQMLVE 1
LFK M +E
Sbjct: 309 SLFKIMQIE 317
Score = 70.1 bits (170), Expect = 2e-10
Identities = 39/128 (30%), Positives = 73/128 (57%), Gaps = 2/128 (1%)
Frame = -2
Query: 384 WTTLINGYILNGDARSALMLCRIMQREGVKPNSVSMASLLSACGTLVSLKHGKCLHAWAI 205
W L++G + N A A+ L + M EGV+ N+ + SLL A G L L+ ++++ +
Sbjct: 392 WNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADLQPVNNINSYLM 451
Query: 204 RQRLDSEVTVETALIDMYAKCNNGDLSYIVF--MKTSRKRTAPWNAVLSGFILNGLARKA 31
R S + V T+LID+Y+KC + + ++ +F + + W+ +++G+ ++G A
Sbjct: 452 RSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETA 511
Query: 30 IQLFKQML 7
+ LFKQM+
Sbjct: 512 VSLFKQMV 519
Score = 61.6 bits (148), Expect = 6e-08
Identities = 32/124 (25%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Frame = -2
Query: 375 LINGYILNGDARSAL-MLCRIMQREGVKPNSVSMASLLSACGTLVSLKHGKCLHAWAIRQ 199
+I YI GD A+ + ++ + P++ + ++ AC L+ +++G+ LH +
Sbjct: 92 MIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLVEYGRVLHGLTLVS 151
Query: 198 RLDSEVTVETALIDMYAKCNNGDLSYIVFMKTSRKRTAPWNAVLSGFILNGLARKAIQLF 19
+ S + V +L+ MY C + + VF K WN +++G+ NG A A+ +F
Sbjct: 152 KFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNGFANTALVVF 211
Query: 18 KQML 7
QM+
Sbjct: 212 NQMV 215