BLASTX nr result

ID: Glycyrrhiza24_contig00031260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031260
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545986.1| PREDICTED: DNA topoisomerase 2-like [Glycine...   119   2e-25
ref|XP_003599271.1| DNA topoisomerase [Medicago truncatula] gi|3...   111   7e-23
sp|O24308.1|TOP2_PEA RecName: Full=DNA topoisomerase 2; AltName:...   110   9e-23
ref|XP_003601827.1| DNA topoisomerase [Medicago truncatula] gi|3...   107   1e-21
emb|CAJ44361.1| putative DNA topoisomerase II [Malus x domestica]      95   7e-18

>ref|XP_003545986.1| PREDICTED: DNA topoisomerase 2-like [Glycine max]
          Length = 1484

 Score =  119 bits (299), Expect = 2e-25
 Identities = 63/87 (72%), Positives = 68/87 (78%)
 Frame = +2

Query: 2    KHILANLERLLLVLDNKVRFILGVVNGEIIVSNRKKADLLMELQQKGFTPMPRKGKSEEP 181
            KHIL NLE+LLL+LDNKVRFILGVVNGEI+VSNRKKA+LL+ELQQKGFTPMPRKGKS EP
Sbjct: 1021 KHILNNLEQLLLILDNKVRFILGVVNGEIVVSNRKKAELLIELQQKGFTPMPRKGKSAEP 1080

Query: 182  QVAGAXXXXXXXXXXXXXGPEPVSVEG 262
            QVAGA               E  SVEG
Sbjct: 1081 QVAGANDEEEQEDDNNTREQETGSVEG 1107


>ref|XP_003599271.1| DNA topoisomerase [Medicago truncatula] gi|355488319|gb|AES69522.1|
            DNA topoisomerase [Medicago truncatula]
          Length = 1567

 Score =  111 bits (277), Expect = 7e-23
 Identities = 54/65 (83%), Positives = 63/65 (96%)
 Frame = +2

Query: 2    KHILANLERLLLVLDNKVRFILGVVNGEIIVSNRKKADLLMELQQKGFTPMPRKGKSEEP 181
            K+ILANLERLLL+LDNKVRFILGVV+GEIIVSNRK+ +LL+EL+QKGFTP+P+KGKS EP
Sbjct: 1075 KYILANLERLLLILDNKVRFILGVVSGEIIVSNRKRTELLIELKQKGFTPIPKKGKSAEP 1134

Query: 182  QVAGA 196
            QVAGA
Sbjct: 1135 QVAGA 1139


>sp|O24308.1|TOP2_PEA RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase
            II; AltName: Full=PsTopII gi|2330651|emb|CAA74891.1|
            topoisomerase II [Pisum sativum]
          Length = 1462

 Score =  110 bits (276), Expect = 9e-23
 Identities = 54/65 (83%), Positives = 62/65 (95%)
 Frame = +2

Query: 2    KHILANLERLLLVLDNKVRFILGVVNGEIIVSNRKKADLLMELQQKGFTPMPRKGKSEEP 181
            ++IL NL RLLL+LDNKVRFILGVVNGEIIVSNRKKA+LL+EL++KGFTPMPRKGKS +P
Sbjct: 991  EYILGNLNRLLLILDNKVRFILGVVNGEIIVSNRKKAELLIELKEKGFTPMPRKGKSTKP 1050

Query: 182  QVAGA 196
            QVAGA
Sbjct: 1051 QVAGA 1055


>ref|XP_003601827.1| DNA topoisomerase [Medicago truncatula] gi|355490875|gb|AES72078.1|
            DNA topoisomerase [Medicago truncatula]
          Length = 1345

 Score =  107 bits (266), Expect = 1e-21
 Identities = 53/65 (81%), Positives = 61/65 (93%)
 Frame = +2

Query: 2    KHILANLERLLLVLDNKVRFILGVVNGEIIVSNRKKADLLMELQQKGFTPMPRKGKSEEP 181
            K++LANLERLLL+LDNKVRFILGVVNGEII+ NRKKA+LL+EL+QKGF+PM RKGKS EP
Sbjct: 959  KYMLANLERLLLILDNKVRFILGVVNGEIIMINRKKAELLIELKQKGFSPMLRKGKSAEP 1018

Query: 182  QVAGA 196
            QV GA
Sbjct: 1019 QVVGA 1023


>emb|CAJ44361.1| putative DNA topoisomerase II [Malus x domestica]
          Length = 1467

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 48/65 (73%), Positives = 56/65 (86%)
 Frame = +2

Query: 2    KHILANLERLLLVLDNKVRFILGVVNGEIIVSNRKKADLLMELQQKGFTPMPRKGKSEEP 181
            K +L +LE  LL L+NKVRFILGVVNGEIIVSNRK+ADL +ELQQKGFTP P+K K+ EP
Sbjct: 988  KVLLEDLELELLKLENKVRFILGVVNGEIIVSNRKRADLFLELQQKGFTPFPKKTKALEP 1047

Query: 182  QVAGA 196
            +VAGA
Sbjct: 1048 EVAGA 1052


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