BLASTX nr result

ID: Glycyrrhiza24_contig00031255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031255
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537071.1| PREDICTED: ABC transporter B family member 2...   165   4e-39
ref|XP_002276489.1| PREDICTED: ABC transporter B family member 2...   159   3e-37
emb|CBI30307.3| unnamed protein product [Vitis vinifera]              146   2e-33
ref|XP_002873123.1| hypothetical protein ARALYDRAFT_487170 [Arab...   142   4e-32
ref|XP_002530326.1| abc transporter, putative [Ricinus communis]...   141   6e-32

>ref|XP_003537071.1| PREDICTED: ABC transporter B family member 29, chloroplastic-like
           [Glycine max]
          Length = 605

 Score =  165 bits (417), Expect = 4e-39
 Identities = 87/99 (87%), Positives = 96/99 (96%), Gaps = 1/99 (1%)
 Frame = -2

Query: 444 STLSGGQRQRLAIARALYQNSSILILDEATSALDSKSELLVRQAVERLMENRTVLVISHR 265
           STLSGGQRQRLAIARA YQNSSILILDEATS+LDSKSELLVRQAVERLM+NRTVLVISHR
Sbjct: 504 STLSGGQRQRLAIARAFYQNSSILILDEATSSLDSKSELLVRQAVERLMQNRTVLVISHR 563

Query: 264 LETVLMAKRIFLLDNGKLEEMPRSTMLNG-HMDSLLSSG 151
           LETV+MAKR+FLLDNGKL+E+P+ST+L+G H DSLLSSG
Sbjct: 564 LETVMMAKRVFLLDNGKLKELPQSTLLDGHHKDSLLSSG 602


>ref|XP_002276489.1| PREDICTED: ABC transporter B family member 29, chloroplastic [Vitis
           vinifera]
          Length = 630

 Score =  159 bits (401), Expect = 3e-37
 Identities = 83/98 (84%), Positives = 92/98 (93%)
 Frame = -2

Query: 444 STLSGGQRQRLAIARALYQNSSILILDEATSALDSKSELLVRQAVERLMENRTVLVISHR 265
           STLSGGQ+QR+AIARALYQN SILILDEATSALDS+SELLVRQAVERLMENRTVLVI+HR
Sbjct: 530 STLSGGQKQRIAIARALYQNCSILILDEATSALDSRSELLVRQAVERLMENRTVLVIAHR 589

Query: 264 LETVLMAKRIFLLDNGKLEEMPRSTMLNGHMDSLLSSG 151
           LETVLMAKR+FLLD+GKLEE+ RS +L G  DSLLS+G
Sbjct: 590 LETVLMAKRVFLLDDGKLEELNRSALLGGKSDSLLSTG 627


>emb|CBI30307.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  146 bits (368), Expect = 2e-33
 Identities = 76/87 (87%), Positives = 84/87 (96%)
 Frame = -2

Query: 444 STLSGGQRQRLAIARALYQNSSILILDEATSALDSKSELLVRQAVERLMENRTVLVISHR 265
           STLSGGQ+QR+AIARALYQN SILILDEATSALDS+SELLVRQAVERLMENRTVLVI+HR
Sbjct: 624 STLSGGQKQRIAIARALYQNCSILILDEATSALDSRSELLVRQAVERLMENRTVLVIAHR 683

Query: 264 LETVLMAKRIFLLDNGKLEEMPRSTML 184
           LETVLMAKR+FLLD+GKLEE+ RS +L
Sbjct: 684 LETVLMAKRVFLLDDGKLEELNRSALL 710


>ref|XP_002873123.1| hypothetical protein ARALYDRAFT_487170 [Arabidopsis lyrata subsp.
           lyrata] gi|297318960|gb|EFH49382.1| hypothetical protein
           ARALYDRAFT_487170 [Arabidopsis lyrata subsp. lyrata]
          Length = 635

 Score =  142 bits (357), Expect = 4e-32
 Identities = 71/98 (72%), Positives = 91/98 (92%)
 Frame = -2

Query: 444 STLSGGQRQRLAIARALYQNSSILILDEATSALDSKSELLVRQAVERLMENRTVLVISHR 265
           S+LSGGQ+QRLAIARALYQNSS+LILDEATSALDS SELLVR+A+ER+M++ TV+VI+HR
Sbjct: 535 SSLSGGQKQRLAIARALYQNSSVLILDEATSALDSLSELLVREALERVMQDHTVIVIAHR 594

Query: 264 LETVLMAKRIFLLDNGKLEEMPRSTMLNGHMDSLLSSG 151
           LETV+MA+R+FLL+ GKL+E+ RS++L+ H DSL S+G
Sbjct: 595 LETVMMAQRVFLLERGKLKELNRSSLLSTHKDSLSSAG 632


>ref|XP_002530326.1| abc transporter, putative [Ricinus communis]
           gi|223530130|gb|EEF32042.1| abc transporter, putative
           [Ricinus communis]
          Length = 650

 Score =  141 bits (355), Expect = 6e-32
 Identities = 73/99 (73%), Positives = 90/99 (90%), Gaps = 1/99 (1%)
 Frame = -2

Query: 444 STLSGGQRQRLAIARALYQNSSILILDEATSALDSKSELLVRQAVERLMENRTVLVISHR 265
           S+LSGGQ+QRLAIARALYQ+SSILILDEATSALDS+SELLVRQA++RLMEN TV++I+HR
Sbjct: 549 SSLSGGQKQRLAIARALYQDSSILILDEATSALDSRSELLVRQALQRLMENHTVIIIAHR 608

Query: 264 LETVLMAKRIFLLDNGKLEEMPRSTMLN-GHMDSLLSSG 151
           LETVLMAKR+F L+NGKLEE+ RS + +  H +SL ++G
Sbjct: 609 LETVLMAKRVFSLENGKLEELSRSNLFSTAHSNSLSATG 647


Top