BLASTX nr result

ID: Glycyrrhiza24_contig00031233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031233
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603447.1| ABC transporter B family member [Medicago tr...   119   3e-25
ref|XP_003609887.1| ABC transporter ATP-binding protein [Medicag...   111   7e-23
ref|XP_003609886.1| ABC transporter ATP-binding protein [Medicag...   111   7e-23
ref|XP_003550579.1| PREDICTED: ABC transporter B family member 4...    96   2e-18
ref|XP_002275143.2| PREDICTED: ABC transporter B family member 1...    73   2e-11

>ref|XP_003603447.1| ABC transporter B family member [Medicago truncatula]
           gi|355492495|gb|AES73698.1| ABC transporter B family
           member [Medicago truncatula]
          Length = 1314

 Score =  119 bits (297), Expect = 3e-25
 Identities = 64/99 (64%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
 Frame = +1

Query: 25  KRFFLGKMVAKASLDGDIASTEMTGSTSH--APVPDPENNQEMXXXXXXXXXXXXXXXXX 198
           +RFF   M+AKASLDGDI +TEMTGST+H   PV   EN QEM                 
Sbjct: 7   QRFFTWTMLAKASLDGDITATEMTGSTNHHHLPVSGHENGQEMADMRQDSKKNKVKDQSK 66

Query: 199 XTVPFCKLFSFADSWDYLLMFVGTIGAVGNGVSMPLMTI 315
            TVPF KLFSFADSWDYLLMFVGTIGAVGNGVSMPL+TI
Sbjct: 67  KTVPFYKLFSFADSWDYLLMFVGTIGAVGNGVSMPLLTI 105


>ref|XP_003609887.1| ABC transporter ATP-binding protein [Medicago truncatula]
           gi|355510942|gb|AES92084.1| ABC transporter ATP-binding
           protein [Medicago truncatula]
          Length = 1204

 Score =  111 bits (277), Expect = 7e-23
 Identities = 62/92 (67%), Positives = 65/92 (70%), Gaps = 2/92 (2%)
 Frame = +1

Query: 46  MVAKASLDGDIASTEMTGSTSH-APVP-DPENNQEMXXXXXXXXXXXXXXXXXXTVPFCK 219
           M+AKASLDGDIASTEMTGSTSH  PVP   EN QEM                  TVPF K
Sbjct: 1   MLAKASLDGDIASTEMTGSTSHHPPVPAGAENVQEMADMQHDSKNNKVKDQSNKTVPFYK 60

Query: 220 LFSFADSWDYLLMFVGTIGAVGNGVSMPLMTI 315
           LF+FADSWDYLLMFVGTI  VGNG+SMPLMTI
Sbjct: 61  LFTFADSWDYLLMFVGTISGVGNGISMPLMTI 92


>ref|XP_003609886.1| ABC transporter ATP-binding protein [Medicago truncatula]
           gi|355510941|gb|AES92083.1| ABC transporter ATP-binding
           protein [Medicago truncatula]
          Length = 1312

 Score =  111 bits (277), Expect = 7e-23
 Identities = 62/92 (67%), Positives = 65/92 (70%), Gaps = 2/92 (2%)
 Frame = +1

Query: 46  MVAKASLDGDIASTEMTGSTSH-APVP-DPENNQEMXXXXXXXXXXXXXXXXXXTVPFCK 219
           M+AKASLDGDIASTEMTGSTSH  PVP   EN QEM                  TVPF K
Sbjct: 1   MLAKASLDGDIASTEMTGSTSHHPPVPAGAENVQEMADMQHDSKNNKVKDQSNKTVPFYK 60

Query: 220 LFSFADSWDYLLMFVGTIGAVGNGVSMPLMTI 315
           LF+FADSWDYLLMFVGTI  VGNG+SMPLMTI
Sbjct: 61  LFTFADSWDYLLMFVGTISGVGNGISMPLMTI 92


>ref|XP_003550579.1| PREDICTED: ABC transporter B family member 4-like [Glycine max]
          Length = 1303

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 52/91 (57%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
 Frame = +1

Query: 46  MVAKASLDGDIASTEMTGSTS-HAPVPDPENNQEMXXXXXXXXXXXXXXXXXXTVPFCKL 222
           MVA+A L+ D+ ST+ TGSTS H P   PEN QE+                  TVPF KL
Sbjct: 1   MVAEAGLEADMTSTKTTGSTSDHPPAQGPENTQEIEYMQQDCKKNKMKGESNKTVPFYKL 60

Query: 223 FSFADSWDYLLMFVGTIGAVGNGVSMPLMTI 315
           FSFADSWD LLM VG I AVGNG+SMPLMTI
Sbjct: 61  FSFADSWDCLLMVVGAISAVGNGISMPLMTI 91


>ref|XP_002275143.2| PREDICTED: ABC transporter B family member 11-like [Vitis vinifera]
          Length = 1294

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 38/76 (50%), Positives = 42/76 (55%)
 Frame = +1

Query: 88  EMTGSTSHAPVPDPENNQEMXXXXXXXXXXXXXXXXXXTVPFCKLFSFADSWDYLLMFVG 267
           + T STSH+ V + E                       TVPFCKLFSFADSWDYL MFVG
Sbjct: 15  QATASTSHSSVMEIEKVPNDTDSKQETDTNREKEESTRTVPFCKLFSFADSWDYLFMFVG 74

Query: 268 TIGAVGNGVSMPLMTI 315
            + A  NGVS PLMTI
Sbjct: 75  AVAAAANGVSTPLMTI 90


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