BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031231
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containi...   154   7e-36
ref|XP_003621820.1| Pentatricopeptide repeat-containing protein,...   111   5e-23
ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containi...    90   2e-16
ref|XP_002319950.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp....    81   8e-14

>ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 727

 Score =  154 bits (389), Expect = 7e-36
 Identities = 77/102 (75%), Positives = 85/102 (83%), Gaps = 6/102 (5%)
 Frame = +2

Query: 2   KNQKVTTSEIPTSCLHLNFIKHLCSSSPLHPQHFVNQD------SFYASLIDNSTHKRHL 163
           KNQKVTT +IP  C  L F+K+LC SS LHP+HFVN D      SFYASLIDNSTHKRHL
Sbjct: 14  KNQKVTTPQIPR-CFVLKFVKYLCFSSALHPEHFVNHDHCFNSDSFYASLIDNSTHKRHL 72

Query: 164 NQIHNQLVVSGLQHNGFLMTKLVNGSSNLGLICHARNLFDEF 289
           +QIHN+LV+SGLQHNGFLMTKLVNGSSNLG IC+AR LFDEF
Sbjct: 73  DQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEF 114


>ref|XP_003621820.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula] gi|355496835|gb|AES78038.1|
           Pentatricopeptide repeat-containing protein, partial
           [Medicago truncatula]
          Length = 114

 Score =  111 bits (278), Expect = 5e-23
 Identities = 62/100 (62%), Positives = 69/100 (69%), Gaps = 3/100 (3%)
 Frame = +2

Query: 2   KNQKVTTSEIPTSCLHLNFIKHLCSSSPLHPQHF---VNQDSFYASLIDNSTHKRHLNQI 172
           K++ VT  EI        F+KHLCS S  +P  F       SFYASLIDNSTH  HL Q+
Sbjct: 13  KHKNVTPFEIH------KFVKHLCSLSLHYPHEFDHCFKSHSFYASLIDNSTHITHLYQV 66

Query: 173 HNQLVVSGLQHNGFLMTKLVNGSSNLGLICHARNLFDEFP 292
           HNQLV+SGLQHN FLMTKLVN SSNLG I +AR LFDEFP
Sbjct: 67  HNQLVLSGLQHNRFLMTKLVNQSSNLGQIFYARKLFDEFP 106


>ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Vitis vinifera] gi|296081235|emb|CBI17979.3| unnamed
           protein product [Vitis vinifera]
          Length = 742

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 51/96 (53%), Positives = 62/96 (64%), Gaps = 4/96 (4%)
 Frame = +2

Query: 17  TTSEIPTSCLH-LNFIKHL---CSSSPLHPQHFVNQDSFYASLIDNSTHKRHLNQIHNQL 184
           T SE P +    LNF   L      S   P    + DSF++SL+D+S HKRHLNQIH QL
Sbjct: 35  TASEFPATLFKFLNFYSSLPLPLDHSDYIPYSGFDFDSFFSSLLDHSVHKRHLNQIHAQL 94

Query: 185 VVSGLQHNGFLMTKLVNGSSNLGLICHARNLFDEFP 292
           VVSGL  +GFL+TK VN S N+G I +AR +FDEFP
Sbjct: 95  VVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFP 130


>ref|XP_002319950.1| predicted protein [Populus trichocarpa] gi|222858326|gb|EEE95873.1|
           predicted protein [Populus trichocarpa]
          Length = 746

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 44/82 (53%), Positives = 56/82 (68%)
 Frame = +2

Query: 47  HLNFIKHLCSSSPLHPQHFVNQDSFYASLIDNSTHKRHLNQIHNQLVVSGLQHNGFLMTK 226
           H N  K  C+ S   P      D FYASLID+S HK HLNQI+ +L+V+GLQ+ GFL+ K
Sbjct: 59  HFNNNKDDCNESTFKP------DKFYASLIDDSIHKTHLNQIYAKLLVTGLQYGGFLIAK 112

Query: 227 LVNGSSNLGLICHARNLFDEFP 292
           LVN +SN+G +  AR LFD+FP
Sbjct: 113 LVNKASNIGEVSCARKLFDKFP 134


>ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330765|gb|EFH61184.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 41/75 (54%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
 Frame = +2

Query: 71  CSSSP-LHPQHFVNQDSFYASLIDNSTHKRHLNQIHNQLVVSGLQHNGFLMTKLVNGSSN 247
           C +SP L+    ++ DSFYASLID+STHK  L QIH +L+V GLQ +GFL+TKL++ SS+
Sbjct: 6   CLASPFLYTNSGIHSDSFYASLIDSSTHKAQLRQIHARLLVLGLQFSGFLITKLIHASSS 65

Query: 248 LGLICHARNLFDEFP 292
            G I  AR +FD+ P
Sbjct: 66  YGDITFARQVFDDLP 80