BLASTX nr result

ID: Glycyrrhiza24_contig00031230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031230
         (617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539581.1| PREDICTED: double-strand break repair protei...   317   1e-84
ref|XP_003596491.1| Meiotic recombination [Medicago truncatula] ...   303   2e-80
ref|XP_002281726.1| PREDICTED: double-strand break repair protei...   283   2e-74
ref|XP_002525759.1| meiotic recombination repair protein, putati...   281   7e-74
ref|XP_004146869.1| PREDICTED: LOW QUALITY PROTEIN: double-stran...   271   9e-71

>ref|XP_003539581.1| PREDICTED: double-strand break repair protein MRE11-like [Glycine
           max]
          Length = 714

 Score =  317 bits (812), Expect = 1e-84
 Identities = 168/208 (80%), Positives = 175/208 (84%), Gaps = 3/208 (1%)
 Frame = -3

Query: 615 VDYSGFMTINPQRFGQKYVGKVANPQDILIFSKATKRDKGAGKIDDSERLRPEELNQQNI 436
           VDYSGFMTINPQRFGQKYVGKVANPQDILIFSKATKR K  GKIDDSERLRPEELNQQNI
Sbjct: 367 VDYSGFMTINPQRFGQKYVGKVANPQDILIFSKATKRAKVEGKIDDSERLRPEELNQQNI 426

Query: 435 EALVAESNLKMEILPVNDLDIALHNFVNKDDKMAFYTCVQNNIVETRTKIAKDSDNLKFD 256
           EALVAESNLKMEILPVNDLDIAL NFVNKDDKMAFY+CV+ NI ETR K+AKDSDN+KF+
Sbjct: 427 EALVAESNLKMEILPVNDLDIALQNFVNKDDKMAFYSCVKYNIEETRNKLAKDSDNVKFE 486

Query: 255 EEDLIVKVGECLEERVKER---SKEPTQFTAGAQSLEDXXXXXXXXXXXXXXXSDDEDAM 85
           EEDLIVKVGECLEERVKER   SKEPTQ TA AQ  +D               SDDEDAM
Sbjct: 487 EEDLIVKVGECLEERVKERSVHSKEPTQLTADAQPWKDFQGRSAAGTGSAVSFSDDEDAM 546

Query: 84  PISGSKQSTRGWKGSSSASQTTTRGRGR 1
           P+S SK STRG KGSS ASQTTTRGRGR
Sbjct: 547 PVSSSKPSTRGRKGSSGASQTTTRGRGR 574


>ref|XP_003596491.1| Meiotic recombination [Medicago truncatula]
           gi|355485539|gb|AES66742.1| Meiotic recombination
           [Medicago truncatula]
          Length = 747

 Score =  303 bits (775), Expect = 2e-80
 Identities = 163/208 (78%), Positives = 170/208 (81%), Gaps = 3/208 (1%)
 Frame = -3

Query: 615 VDYSGFMTINPQRFGQKYVGKVANPQDILIFSKATKRDKGAGKIDDSERLRPEELNQQNI 436
           VDYSGFMTINPQRFGQKYVGKVANPQDILIFSKA+K +KG GKIDDSERLRPEELNQQNI
Sbjct: 366 VDYSGFMTINPQRFGQKYVGKVANPQDILIFSKASKLEKGVGKIDDSERLRPEELNQQNI 425

Query: 435 EALVAESNLKMEILPVNDLDIALHNFVNKDDKMAFYTCVQNNIVETRTKIAKDSDNLKFD 256
           EALVAE+NLKMEILPVNDLDIALHNFVNKDDKMAFYTCVQ NI ETR KIAKDS+  K D
Sbjct: 426 EALVAENNLKMEILPVNDLDIALHNFVNKDDKMAFYTCVQYNIDETRNKIAKDSNEPKLD 485

Query: 255 EEDLIVKVGECLEERVKER---SKEPTQFTAGAQSLEDXXXXXXXXXXXXXXXSDDEDAM 85
            EDL+VKVGEC EERVKER   SK+ +QFT GAQS E                SDDEDAM
Sbjct: 486 VEDLVVKVGECFEERVKERSTHSKDSSQFTPGAQSFEGFQGRSAAGADSAVSFSDDEDAM 545

Query: 84  PISGSKQSTRGWKGSSSASQTTTRGRGR 1
           P S SK STRG KGS S SQTTTRGRGR
Sbjct: 546 PTSSSKPSTRGRKGSVS-SQTTTRGRGR 572


>ref|XP_002281726.1| PREDICTED: double-strand break repair protein MRE11 [Vitis vinifera]
            gi|302143084|emb|CBI20379.3| unnamed protein product
            [Vitis vinifera]
          Length = 731

 Score =  283 bits (724), Expect = 2e-74
 Identities = 150/220 (68%), Positives = 172/220 (78%), Gaps = 15/220 (6%)
 Frame = -3

Query: 615  VDYSGFMTINPQRFGQKYVGKVANPQDILIFSKATKRDKGAGKIDDSERLRPEELNQQNI 436
            VDYSGFMTINPQRFGQKYVGKVANPQDILIF+KA+++ +   KIDDSERLRPEELNQQNI
Sbjct: 370  VDYSGFMTINPQRFGQKYVGKVANPQDILIFTKASRKGRSEAKIDDSERLRPEELNQQNI 429

Query: 435  EALVAESNLKMEILPVNDLDIALHNFVNKDDKMAFYTCVQNNIVETRTKIAKDSDNLKFD 256
            EALVAE+NLKMEILPVNDLD+ALHNFVNKDDKMAFY+CVQ N+ ETR+KIA+DSD LKF+
Sbjct: 430  EALVAENNLKMEILPVNDLDVALHNFVNKDDKMAFYSCVQYNLEETRSKIARDSDPLKFE 489

Query: 255  EEDLIVKVGECLEERVKER---SKEPTQFTAGAQSLEDXXXXXXXXXXXXXXXSDDEDAM 85
            EEDLI+KVGECLEERVKER   SKE  QF + A+SLE+               SDDED  
Sbjct: 490  EEDLILKVGECLEERVKERSVHSKETPQFMSSARSLENIRSKGTAETGSAVSFSDDEDPT 549

Query: 84   PISGSKQSTRGWKGSSSA------------SQTTTRGRGR 1
             +SGSK +TRG KGSS+              +++TRGRGR
Sbjct: 550  QLSGSKSATRGRKGSSATFKSSHDASEQGKGKSSTRGRGR 589


>ref|XP_002525759.1| meiotic recombination repair protein, putative [Ricinus communis]
            gi|223534909|gb|EEF36595.1| meiotic recombination repair
            protein, putative [Ricinus communis]
          Length = 765

 Score =  281 bits (719), Expect = 7e-74
 Identities = 149/221 (67%), Positives = 169/221 (76%), Gaps = 16/221 (7%)
 Frame = -3

Query: 615  VDYSGFMTINPQRFGQKYVGKVANPQDILIFSKATKRDKGAGKIDDSERLRPEELNQQNI 436
            VDYSGFMTINPQRFGQKYVGKVANPQDILIFSKA+++ +G  KIDDSERLRPEELNQQNI
Sbjct: 370  VDYSGFMTINPQRFGQKYVGKVANPQDILIFSKASRKGQGQAKIDDSERLRPEELNQQNI 429

Query: 435  EALVAESNLKMEILPVNDLDIALHNFVNKDDKMAFYTCVQNNIVETRTKIAKDSDNLKFD 256
            EALVAESNLKMEILPVNDLD+ALHNFVNKDDKMAFY+CVQ N+ ETR KIAKDSD +KF+
Sbjct: 430  EALVAESNLKMEILPVNDLDVALHNFVNKDDKMAFYSCVQYNLQETRNKIAKDSDTIKFE 489

Query: 255  EEDLIVKVGECLEERVKER---SKEPTQFTAGAQSLEDXXXXXXXXXXXXXXXSDDEDAM 85
            +ED+I+KVGECLEERVKER   SK+  Q ++ A S+ED               SDDED  
Sbjct: 490  KEDIILKVGECLEERVKERSMHSKDAPQISSSAHSIEDFRSIGTAGVGSAVSFSDDEDTT 549

Query: 84   PISGSKQSTRGWKGSSSAS-------------QTTTRGRGR 1
             +SGSK S+R  KGS   S             +T+TRGRGR
Sbjct: 550  QLSGSKASSRNQKGSRLVSRPSYDDASEADKGKTSTRGRGR 590


>ref|XP_004146869.1| PREDICTED: LOW QUALITY PROTEIN: double-strand break repair protein
            MRE11-like [Cucumis sativus]
          Length = 747

 Score =  271 bits (692), Expect = 9e-71
 Identities = 151/220 (68%), Positives = 169/220 (76%), Gaps = 15/220 (6%)
 Frame = -3

Query: 615  VDYSGFMTINPQRFGQKYVGKVANPQDILIFSKATKRDKGAGKIDDSERLRPEELNQQNI 436
            VDYSGFMTINPQRFGQKYVGKVANPQDILIFSKA+++ +   KIDDSERLRPEELNQQNI
Sbjct: 379  VDYSGFMTINPQRFGQKYVGKVANPQDILIFSKASRKGRNEVKIDDSERLRPEELNQQNI 438

Query: 435  EALVAESNLKMEILPVNDLDIALHNFVNKDDKMAFYTCVQNNIVETRTKIAKDSDNLKFD 256
            EALVAE+NLKMEILPVNDLD+ALHNFVNKDDKMAFY+CVQ N+ ETR KI+ D+D+LKF+
Sbjct: 439  EALVAENNLKMEILPVNDLDVALHNFVNKDDKMAFYSCVQYNLEETRNKISHDADSLKFE 498

Query: 255  EEDLIVKVGECLEE-------RVKER---SKEPTQFTAGAQSLEDXXXXXXXXXXXXXXX 106
            EEDLI+KVGECLEE       RVKER   SK  T FT+  QS +D               
Sbjct: 499  EEDLILKVGECLEEKIYILQDRVKERNTHSKNDTVFTSSIQSSKDFGSRSSMTVGSAVSF 558

Query: 105  SDDEDAMPISGSKQSTRGWKGSSSASQ-----TTTRGRGR 1
            SDDEDA   SGSK STRG K SS A++     T+TRGRGR
Sbjct: 559  SDDEDAAKTSGSK-STRGRKVSSRAAEDTSTKTSTRGRGR 597


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