BLASTX nr result

ID: Glycyrrhiza24_contig00031205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031205
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615959.1| RING finger protein [Medicago truncatula] gi...   158   4e-37
ref|XP_003518333.1| PREDICTED: E3 ubiquitin-protein ligase liste...   152   3e-35
ref|XP_003632124.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   108   5e-22
ref|XP_002517743.1| conserved hypothetical protein [Ricinus comm...    93   2e-17
ref|XP_004162713.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    91   8e-17

>ref|XP_003615959.1| RING finger protein [Medicago truncatula]
           gi|355517294|gb|AES98917.1| RING finger protein
           [Medicago truncatula]
          Length = 1683

 Score =  158 bits (400), Expect = 4e-37
 Identities = 75/97 (77%), Positives = 88/97 (90%)
 Frame = -3

Query: 293 SLSADRLAFFQAFKECFLWSLKNASRYNDGEDSINHFRVTLVDNILVKLLWQDFLMTGSL 114
           SLSADRLAFFQ+F+ECFLWSLKNASRYN G+DSI+HFRVTL+DNILVKL+W+DFL TGS 
Sbjct: 223 SLSADRLAFFQSFEECFLWSLKNASRYNGGDDSISHFRVTLIDNILVKLIWRDFLTTGSS 282

Query: 113 KGHDIINTGKDGDSSEHNVAHNKKVDLLNMKYPMPYL 3
           KG+DII TGK+ DSSE  ++H+KKVD+ N KYPMPYL
Sbjct: 283 KGYDII-TGKESDSSEKTLSHSKKVDVQNTKYPMPYL 318


>ref|XP_003518333.1| PREDICTED: E3 ubiquitin-protein ligase listerin-like [Glycine max]
          Length = 1885

 Score =  152 bits (384), Expect = 3e-35
 Identities = 73/97 (75%), Positives = 84/97 (86%)
 Frame = -3

Query: 293 SLSADRLAFFQAFKECFLWSLKNASRYNDGEDSINHFRVTLVDNILVKLLWQDFLMTGSL 114
           SLSADRLAF QA KECFLWSLKNASRYNDG DSI HF+VTL+DN+LVKLLW+DFL  G  
Sbjct: 415 SLSADRLAFLQALKECFLWSLKNASRYNDG-DSIRHFQVTLIDNVLVKLLWKDFLTAGIP 473

Query: 113 KGHDIINTGKDGDSSEHNVAHNKKVDLLNMKYPMPYL 3
           K +DIIN+GK  D+SE NV+HNKKVD+++ KYPMPYL
Sbjct: 474 KANDIINSGKATDTSEENVSHNKKVDMVDTKYPMPYL 510


>ref|XP_003632124.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           listerin-like [Vitis vinifera]
          Length = 1923

 Score =  108 bits (270), Expect = 5e-22
 Identities = 49/96 (51%), Positives = 68/96 (70%), Gaps = 2/96 (2%)
 Frame = -3

Query: 287 SADRLAFFQAFKECFLWSLKNASRYNDGEDSINHFRVTLVDNILVKLLWQDFLMTGSLKG 108
           +ADR+AFFQAFKECFLW L NASRY +G D+I+HFRVTL+D++LVKL W +++   S K 
Sbjct: 432 NADRVAFFQAFKECFLWGLHNASRYCNGVDAIHHFRVTLIDSVLVKLFWHEYMSFSSSKN 491

Query: 107 HDIINTGKDGDSSEHN--VAHNKKVDLLNMKYPMPY 6
            D++  G   D SE +  + H + ++  N+KYP  Y
Sbjct: 492 QDVVRWGNSKDPSESSTQLVHKRAMEKQNIKYPKSY 527


>ref|XP_002517743.1| conserved hypothetical protein [Ricinus communis]
           gi|223543141|gb|EEF44675.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1912

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 47/98 (47%), Positives = 61/98 (62%), Gaps = 2/98 (2%)
 Frame = -3

Query: 293 SLSADRLAFFQAFKECFLWSLKNASRYNDGEDSINHFRVTLVDNILVKLLWQDFLMTGSL 114
           S  AD L FF AFKECFLW L+NASRY +  DS++ FRVT+V NIL+KLLWQ++L     
Sbjct: 412 STIADVLKFFSAFKECFLWGLQNASRYCENPDSVHQFRVTIVSNILIKLLWQEYLFFAGS 471

Query: 113 KGHDIINTGKDGDSSEH--NVAHNKKVDLLNMKYPMPY 6
              +    G   D  +H   ++  K V+  N+KYPM Y
Sbjct: 472 NNQNEAPIGTSEDPPKHAGAISLQKIVESRNIKYPMSY 509


>ref|XP_004162713.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           listerin-like [Cucumis sativus]
          Length = 1755

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 50/98 (51%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
 Frame = -3

Query: 293 SLSADRLAFFQAFKECFLWSLKNASRYNDGEDSINHFRVTLVDNILVKLLWQDFLMTGSL 114
           S S +RLAFFQAFKECFLW ++NAS + +G+D   HF+VTLVD ILVK+LW+D+L    L
Sbjct: 433 SSSTERLAFFQAFKECFLWGIQNASSFCNGDD-FAHFQVTLVDAILVKILWKDYLHVQCL 491

Query: 113 KGHDIINTGKDGDSSEHNVAHNKKV-DLLNMKYPMPYL 3
           K  D +        SE    +NK + D+ + KYPM YL
Sbjct: 492 KNQDRV-------FSEDEPLNNKMIEDIPSTKYPMSYL 522


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