BLASTX nr result

ID: Glycyrrhiza24_contig00031193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031193
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605934.1| Exosome complex exonuclease RRP6 [Medicago t...    55   8e-06

>ref|XP_003605934.1| Exosome complex exonuclease RRP6 [Medicago truncatula]
           gi|355506989|gb|AES88131.1| Exosome complex exonuclease
           RRP6 [Medicago truncatula]
          Length = 974

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 33/72 (45%), Positives = 35/72 (48%)
 Frame = +1

Query: 40  MDNGHKTRVACTIAALVAATIISXXXXXXXXXXXKHLNNXXXXXXXXXXEAKPQYTFKRV 219
           M+N HKTRVA TI  L  A II            +              E KPQ  FKRV
Sbjct: 1   MNNEHKTRVAFTIVTLTTAAII---FFTVRRMRRRKQRESPSSSCYSHSEPKPQSAFKRV 57

Query: 220 LADNSYTPFKHL 255
           LADNSY PFKHL
Sbjct: 58  LADNSYAPFKHL 69


Top