BLASTX nr result

ID: Glycyrrhiza24_contig00031192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031192
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28520.2| HRDC; Polynucleotidyl transferase, Ribonuclease H...   177   8e-43
ref|XP_003551099.1| PREDICTED: exosome component 10-like [Glycin...   171   8e-41
ref|XP_003554038.1| PREDICTED: exosome component 10-like [Glycin...   168   5e-40
ref|XP_003525715.1| PREDICTED: exosome component 10-like [Glycin...   167   1e-39
ref|XP_002319182.1| predicted protein [Populus trichocarpa] gi|2...   155   3e-36

>gb|ABD28520.2| HRDC; Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 341

 Score =  177 bits (449), Expect = 8e-43
 Identities = 88/105 (83%), Positives = 96/105 (91%)
 Frame = -3

Query: 315 IKLFALSKESESSDDPLLEVYKRSYDVCMKLYEKELLTDNSYLNIKGLQGAGFNAQQLAT 136
           IKLF LSKESES DDPLLEVY+RSY+VCM+LYEK+LLT+NS+LNIKGL+GAGFN QQLA 
Sbjct: 158 IKLFELSKESESPDDPLLEVYQRSYNVCMQLYEKDLLTENSFLNIKGLRGAGFNGQQLAV 217

Query: 135 VSGLYEWRDRLARAEDESTGYILPKKIILEIAKQMPVTTSNLRRL 1
           VSGLYEWRD LARAEDESTGYILP K+IL IAK MPVT SNLRRL
Sbjct: 218 VSGLYEWRDVLARAEDESTGYILPNKVILLIAKHMPVTASNLRRL 262


>ref|XP_003551099.1| PREDICTED: exosome component 10-like [Glycine max]
          Length = 889

 Score =  171 bits (432), Expect = 8e-41
 Identities = 88/108 (81%), Positives = 97/108 (89%), Gaps = 3/108 (2%)
 Frame = -3

Query: 315 IKLFALSKESESS---DDPLLEVYKRSYDVCMKLYEKELLTDNSYLNIKGLQGAGFNAQQ 145
           IKLFALSKESESS   D PL+EVYKRSYDVC++LYEKELLT+NSYL+I GLQGAGFNAQQ
Sbjct: 422 IKLFALSKESESSESSDTPLVEVYKRSYDVCIQLYEKELLTENSYLHIYGLQGAGFNAQQ 481

Query: 144 LATVSGLYEWRDRLARAEDESTGYILPKKIILEIAKQMPVTTSNLRRL 1
           LA VSGL EWRD +ARAEDESTGY+LP K +LEIAKQMP+TTS LRRL
Sbjct: 482 LAIVSGLCEWRDIVARAEDESTGYVLPNKSVLEIAKQMPLTTSKLRRL 529


>ref|XP_003554038.1| PREDICTED: exosome component 10-like [Glycine max]
          Length = 643

 Score =  168 bits (425), Expect = 5e-40
 Identities = 83/105 (79%), Positives = 94/105 (89%)
 Frame = -3

Query: 315 IKLFALSKESESSDDPLLEVYKRSYDVCMKLYEKELLTDNSYLNIKGLQGAGFNAQQLAT 136
           IKLFALSKESE SD+PLLEVYKRSYDVCM+LYEKELL ++SYL+I GL+GAGFNAQQLA 
Sbjct: 349 IKLFALSKESEGSDNPLLEVYKRSYDVCMQLYEKELLKEDSYLHIWGLRGAGFNAQQLAV 408

Query: 135 VSGLYEWRDRLARAEDESTGYILPKKIILEIAKQMPVTTSNLRRL 1
           VSGL+EWRD LARA+DE  GY+LP +IILEIA QMPV  SNLRR+
Sbjct: 409 VSGLWEWRDGLARADDEGPGYVLPNRIILEIANQMPVIISNLRRI 453


>ref|XP_003525715.1| PREDICTED: exosome component 10-like [Glycine max]
          Length = 877

 Score =  167 bits (422), Expect = 1e-39
 Identities = 86/108 (79%), Positives = 95/108 (87%), Gaps = 3/108 (2%)
 Frame = -3

Query: 315 IKLFALSKESESS---DDPLLEVYKRSYDVCMKLYEKELLTDNSYLNIKGLQGAGFNAQQ 145
           I+LFALSKESESS   D P +EVYKRSYDVCM+LYEKE LT+NSYL+I GLQGAGFNAQQ
Sbjct: 418 IRLFALSKESESSESSDTPPVEVYKRSYDVCMQLYEKEFLTENSYLHIYGLQGAGFNAQQ 477

Query: 144 LATVSGLYEWRDRLARAEDESTGYILPKKIILEIAKQMPVTTSNLRRL 1
           LA VSGL EWRD +ARAEDESTGY+LP K +LEIAKQMP+TTS LRRL
Sbjct: 478 LAIVSGLCEWRDIVARAEDESTGYVLPNKSVLEIAKQMPLTTSKLRRL 525


>ref|XP_002319182.1| predicted protein [Populus trichocarpa] gi|222857558|gb|EEE95105.1|
           predicted protein [Populus trichocarpa]
          Length = 858

 Score =  155 bits (392), Expect = 3e-36
 Identities = 77/107 (71%), Positives = 91/107 (85%), Gaps = 2/107 (1%)
 Frame = -3

Query: 315 IKLFALSK--ESESSDDPLLEVYKRSYDVCMKLYEKELLTDNSYLNIKGLQGAGFNAQQL 142
           ++   LSK  ++E++D PLLEVYKRSYDVCM+LYEKEL T+NSYLN+ GL  AGFNAQQL
Sbjct: 397 MRALLLSKPIDNENADPPLLEVYKRSYDVCMQLYEKELFTENSYLNMYGLPSAGFNAQQL 456

Query: 141 ATVSGLYEWRDRLARAEDESTGYILPKKIILEIAKQMPVTTSNLRRL 1
           A V+GLYEWRD +ARAEDESTGYILP K +LEIAK+MPVT S LR+L
Sbjct: 457 AIVAGLYEWRDAIARAEDESTGYILPNKTLLEIAKEMPVTISKLRQL 503


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