BLASTX nr result

ID: Glycyrrhiza24_contig00031171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031171
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624278.1| Heterogeneous nuclear ribonucleoprotein Q [M...   148   5e-34
gb|ABN05926.1| RNA-binding region RNP-1 (RNA recognition motif) ...   148   5e-34
ref|XP_003624280.1| Heterogeneous nuclear ribonucleoprotein Q [M...   143   1e-32
ref|XP_003534480.1| PREDICTED: uncharacterized protein LOC100811...   136   2e-30
ref|XP_003552481.1| PREDICTED: uncharacterized protein LOC100808...   134   1e-29

>ref|XP_003624278.1| Heterogeneous nuclear ribonucleoprotein Q [Medicago truncatula]
           gi|355499293|gb|AES80496.1| Heterogeneous nuclear
           ribonucleoprotein Q [Medicago truncatula]
          Length = 822

 Score =  148 bits (373), Expect = 5e-34
 Identities = 72/103 (69%), Positives = 77/103 (74%)
 Frame = +3

Query: 6   PHLSYREGRPRDYDTLSGSKRPYTAMDNVPPRYADAGSRQSRSRLDYDYGGGASQYREAY 185
           P LSYREGRPRDYD LSGSKRPY A+D++ PRYADAG+RQSRSRLDYDYGG AS+YREAY
Sbjct: 627 PRLSYREGRPRDYDALSGSKRPYAAIDDISPRYADAGARQSRSRLDYDYGGSASRYREAY 686

Query: 186 VDXXXXXXXXXXXXXXXXXTQNSHGAYSSRQDTSYGRGSYGGS 314
            D                  QNSHGAYSSRQD SYGRGS GGS
Sbjct: 687 GDRLERSSLGYSGSRSSLSNQNSHGAYSSRQDPSYGRGSLGGS 729


>gb|ABN05926.1| RNA-binding region RNP-1 (RNA recognition motif) [Medicago
           truncatula]
          Length = 824

 Score =  148 bits (373), Expect = 5e-34
 Identities = 72/103 (69%), Positives = 77/103 (74%)
 Frame = +3

Query: 6   PHLSYREGRPRDYDTLSGSKRPYTAMDNVPPRYADAGSRQSRSRLDYDYGGGASQYREAY 185
           P LSYREGRPRDYD LSGSKRPY A+D++ PRYADAG+RQSRSRLDYDYGG AS+YREAY
Sbjct: 627 PRLSYREGRPRDYDALSGSKRPYAAIDDISPRYADAGARQSRSRLDYDYGGSASRYREAY 686

Query: 186 VDXXXXXXXXXXXXXXXXXTQNSHGAYSSRQDTSYGRGSYGGS 314
            D                  QNSHGAYSSRQD SYGRGS GGS
Sbjct: 687 GDRLERSSLGYSGSRSSLSNQNSHGAYSSRQDPSYGRGSLGGS 729


>ref|XP_003624280.1| Heterogeneous nuclear ribonucleoprotein Q [Medicago truncatula]
           gi|355499295|gb|AES80498.1| Heterogeneous nuclear
           ribonucleoprotein Q [Medicago truncatula]
          Length = 729

 Score =  143 bits (361), Expect = 1e-32
 Identities = 69/100 (69%), Positives = 74/100 (74%)
 Frame = +3

Query: 6   PHLSYREGRPRDYDTLSGSKRPYTAMDNVPPRYADAGSRQSRSRLDYDYGGGASQYREAY 185
           P LSYREGRPRDYD LSGSKRPY A+D++ PRYADAG+RQSRSRLDYDYGG AS+YREAY
Sbjct: 627 PRLSYREGRPRDYDALSGSKRPYAAIDDISPRYADAGARQSRSRLDYDYGGSASRYREAY 686

Query: 186 VDXXXXXXXXXXXXXXXXXTQNSHGAYSSRQDTSYGRGSY 305
            D                  QNSHGAYSSRQD SYGRG Y
Sbjct: 687 GDRLERSSLGYSGSRSSLSNQNSHGAYSSRQDPSYGRGEY 726


>ref|XP_003534480.1| PREDICTED: uncharacterized protein LOC100811387 [Glycine max]
          Length = 778

 Score =  136 bits (343), Expect = 2e-30
 Identities = 67/104 (64%), Positives = 74/104 (71%)
 Frame = +3

Query: 3   PPHLSYREGRPRDYDTLSGSKRPYTAMDNVPPRYADAGSRQSRSRLDYDYGGGASQYREA 182
           PPHLSY EGRPRDYD+LSGSKRPYTA+D+VPPRY D G+RQSRSRLDYDYGG ASQY +A
Sbjct: 626 PPHLSYHEGRPRDYDSLSGSKRPYTAIDDVPPRY-DTGARQSRSRLDYDYGGSASQYGDA 684

Query: 183 YVDXXXXXXXXXXXXXXXXXTQNSHGAYSSRQDTSYGRGSYGGS 314
           Y D                  Q+ HG Y SRQ  SYG GS+GGS
Sbjct: 685 YGDRLGRSSLGYSGSRNSISNQDLHGTYGSRQGMSYGGGSFGGS 728


>ref|XP_003552481.1| PREDICTED: uncharacterized protein LOC100808583 [Glycine max]
          Length = 785

 Score =  134 bits (336), Expect = 1e-29
 Identities = 66/104 (63%), Positives = 74/104 (71%)
 Frame = +3

Query: 3   PPHLSYREGRPRDYDTLSGSKRPYTAMDNVPPRYADAGSRQSRSRLDYDYGGGASQYREA 182
           PPHLSYREGRPRDYDTLSGSKRPYT +D+VPPRY D  +RQSRSRL+YDYGG ASQY +A
Sbjct: 633 PPHLSYREGRPRDYDTLSGSKRPYTDIDDVPPRY-DTSARQSRSRLNYDYGGSASQYGDA 691

Query: 183 YVDXXXXXXXXXXXXXXXXXTQNSHGAYSSRQDTSYGRGSYGGS 314
           Y D                 +Q+ HG Y SRQ  SYG GS+GGS
Sbjct: 692 YGDRLGRSSLGYSGSRNSISSQDLHGTYGSRQGMSYGGGSFGGS 735


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