BLASTX nr result

ID: Glycyrrhiza24_contig00031164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031164
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08564.1| RNA-directed DNA polymerase (Reverse transcriptas...    68   9e-10
ref|XP_003521972.1| PREDICTED: uncharacterized protein LOC100800...    67   2e-09
ref|XP_003541643.1| PREDICTED: uncharacterized protein LOC100817...    66   3e-09
ref|XP_003553268.1| PREDICTED: putative ribonuclease H protein A...    65   6e-09
gb|AER13156.1| putative retrotransposon [Phaseolus vulgaris]           65   7e-09

>gb|ABN08564.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
            truncatula]
          Length = 977

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
 Frame = +1

Query: 10   CLPRNKGGLGAKDLKLFNPSLLAK*RWRLCTDQSAMWRELMLFRYGDGIAKCGTYLQIRQ 189
            C PR KGGLG  D+++ N SLLAK RWRL     A+W++++  +YG  I    ++     
Sbjct: 745  CQPRAKGGLGVGDMRVVNLSLLAKWRWRLLQKDQALWKDVLESKYGYRINFVLSHTDNLW 804

Query: 190  Q--GSIWMKDLFLLEHDRGVPDLWFSNALCRKLGNGSSIKFW 309
                S W  D+  LE    V   WF++ + RK+G+G + +FW
Sbjct: 805  PVCTSRWWLDVVSLE--EAVGSNWFNSEMKRKVGSGENTRFW 844


>ref|XP_003521972.1| PREDICTED: uncharacterized protein LOC100800774 [Glycine max]
          Length = 684

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 40/104 (38%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
 Frame = +1

Query: 10  CLPRNKGGLGAKDLKLFNPSLLAK*RWRLCTDQSAMWRELMLFRYGDGIAKCGTYLQIRQ 189
           CLP++KGGLG KDL  FN +LL K  W L  + + +W  ++L +YG     C    +   
Sbjct: 252 CLPKSKGGLGIKDLTKFNEALLGKWGWELANNHNQLWARVLLSKYGGWNTLCSG--RDSA 309

Query: 190 QGSIWMKDLFLLEHDRGVPDLWFSNALCR----KLGNGSSIKFW 309
             S W KDL      R V     SN+L      K+G+GS +KFW
Sbjct: 310 HFSQWWKDL------RSVFQQHHSNSLINNFRWKVGDGSRLKFW 347


>ref|XP_003541643.1| PREDICTED: uncharacterized protein LOC100817727 [Glycine max]
          Length = 1869

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
 Frame = +1

Query: 10  CLPRNKGGLGAKDLKLFNPSLLAK*RWRLCTDQSAMWRELMLFRYGDGIA-----KCGTY 174
           CLP+ KGGLG KDL  FN +LL+K  W L  +Q+ +W   ++ +YG   A      C  +
Sbjct: 142 CLPKTKGGLGIKDLTKFNEALLSKWGWELANNQNHLWARTLMSKYGGWNALIHGRNCTGF 201

Query: 175 LQIRQQGSIWMKDL---FLLEHDRGVPDLWFSNALCRKLGNGSSIKFW 309
                  S W KDL   F  +H   +     ++ L  K+GNG+ IKFW
Sbjct: 202 -------SNWWKDLKSIFQQQHSNSL-----TSNLRWKMGNGAKIKFW 237


>ref|XP_003553268.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 625

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
 Frame = +1

Query: 10  CLPRNKGGLGAKDLKLFNPSLLAK*RWRLCTDQSAMWRELMLFRYGDGIAKCGTYLQIRQ 189
           CLP++KGGLG KDL  FN +LL K  W L  + + +W  ++L +YG     C    +   
Sbjct: 252 CLPKSKGGLGIKDLTKFNEALLGKWGWELANNHNQLWARVLLSKYGGWNTLCSG--RDNA 309

Query: 190 QGSIWMKDLFLLEHDRGVPDLWFSNALCR----KLGNGSSIKFW 309
             S W KDL      R V     SN+L      K+G+GS + FW
Sbjct: 310 HFSQWWKDL------RSVFQQHHSNSLINNFRWKVGDGSRLNFW 347


>gb|AER13156.1| putative retrotransposon [Phaseolus vulgaris]
          Length = 1759

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 34/99 (34%), Positives = 56/99 (56%)
 Frame = +1

Query: 10   CLPRNKGGLGAKDLKLFNPSLLAK*RWRLCTDQSAMWRELMLFRYGDGIAKCGTYLQIRQ 189
            C P+ +GGLG ++++LFN +LLAK RWR  +++   W+ L+  +Y  GI    T ++ + 
Sbjct: 1311 CRPKEEGGLGCRNIRLFNQALLAKWRWRCVSEEKGRWKTLLESKYNLGIDSSQTPVKSQ- 1369

Query: 190  QGSIWMKDLFLLEHDRGVPDLWFSNALCRKLGNGSSIKF 306
              S W +DL  +  + G    WF   L  ++G G  +KF
Sbjct: 1370 --SWWWRDLSKMCKEGGGKG-WFQEELGWEIGYGDKVKF 1405


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