BLASTX nr result

ID: Glycyrrhiza24_contig00031163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031163
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242695.1| uncharacterized protein LOC100811977 [Glycin...    75   6e-12
ref|XP_003526576.1| PREDICTED: protein boule-like [Glycine max]        74   1e-11
ref|XP_003544797.1| PREDICTED: uncharacterized protein LOC100788...    70   2e-10
ref|XP_002301058.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
ref|XP_003615131.1| RNA-binding protein [Medicago truncatula] gi...    66   3e-09

>ref|NP_001242695.1| uncharacterized protein LOC100811977 [Glycine max]
           gi|255644898|gb|ACU22949.1| unknown [Glycine max]
          Length = 287

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 39/51 (76%), Positives = 42/51 (82%), Gaps = 2/51 (3%)
 Frame = -3

Query: 147 AQTRTPPIAYFDAMAQ--TQHRSQFGDTTFTKLFVGGLAWETPTEEMRKYF 1
           AQTRTP I+  D+MA     +RS FGDTTFTKLFVGGLAWETPTEEMRKYF
Sbjct: 9   AQTRTP-ISSLDSMAHHHPHYRSPFGDTTFTKLFVGGLAWETPTEEMRKYF 58


>ref|XP_003526576.1| PREDICTED: protein boule-like [Glycine max]
          Length = 287

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 39/51 (76%), Positives = 41/51 (80%), Gaps = 2/51 (3%)
 Frame = -3

Query: 147 AQTRTPPIAYFDAMAQ--TQHRSQFGDTTFTKLFVGGLAWETPTEEMRKYF 1
           A TRTP I+  DAMA     +RS FGDTTFTKLFVGGLAWETPTEEMRKYF
Sbjct: 9   APTRTP-ISSLDAMAHHHPHYRSPFGDTTFTKLFVGGLAWETPTEEMRKYF 58


>ref|XP_003544797.1| PREDICTED: uncharacterized protein LOC100788516 [Glycine max]
          Length = 274

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = -3

Query: 108 MAQTQHRSQFGDTTFTKLFVGGLAWETPTEEMRKYF 1
           MA   +RSQFGDTTFTK+FVGGLAWETPTEEMRKYF
Sbjct: 1   MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRKYF 36


>ref|XP_002301058.1| predicted protein [Populus trichocarpa]
          gi|222842784|gb|EEE80331.1| predicted protein [Populus
          trichocarpa]
          Length = 90

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 29/31 (93%), Positives = 31/31 (100%)
 Frame = -3

Query: 93 HRSQFGDTTFTKLFVGGLAWETPTEEMRKYF 1
          HRSQFGDTTFTK+FVGGLAWETPTEEMR+YF
Sbjct: 2  HRSQFGDTTFTKVFVGGLAWETPTEEMRRYF 32


>ref|XP_003615131.1| RNA-binding protein [Medicago truncatula]
           gi|355516466|gb|AES98089.1| RNA-binding protein
           [Medicago truncatula]
          Length = 283

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 29/36 (80%), Positives = 32/36 (88%)
 Frame = -3

Query: 108 MAQTQHRSQFGDTTFTKLFVGGLAWETPTEEMRKYF 1
           MA   +RSQFGDTTFTK+FVGGLAWETPT+EMR YF
Sbjct: 1   MAYPHYRSQFGDTTFTKVFVGGLAWETPTDEMRTYF 36


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