BLASTX nr result

ID: Glycyrrhiza24_contig00031159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031159
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624851.1| Rpp4 candidate [Medicago truncatula] gi|3554...   131   5e-29
ref|XP_003588414.1| Nascent polypeptide-associated complex alpha...   122   3e-26
ref|XP_003613421.1| Disease resistance protein [Medicago truncat...   117   7e-25
ref|XP_003624880.1| Disease resistance protein RPS2 [Medicago tr...   112   3e-23
ref|XP_003624881.1| Cc-nbs-lrr resistance protein [Medicago trun...    58   9e-07

>ref|XP_003624851.1| Rpp4 candidate [Medicago truncatula] gi|355499866|gb|AES81069.1| Rpp4
            candidate [Medicago truncatula]
          Length = 1963

 Score =  131 bits (330), Expect = 5e-29
 Identities = 67/108 (62%), Positives = 82/108 (75%)
 Frame = +1

Query: 1    CPKIATFPHRNVIISTPNLDTVELWDDMMRFDVRTLGDVNLTIHYIQNEMEYKVELQELE 180
            CP + TFPH NVI+ TPNLD   LW + +   V+TLGD+NLTI+Y+ N  +YK ELQ+LE
Sbjct: 1675 CPNMRTFPHGNVIVDTPNLD--HLWLEWIY--VQTLGDLNLTIYYLHNSEKYKAELQKLE 1730

Query: 181  TFRGIEQRDQRLLGYIRRVRDLELENCHKLLNCIPSNMMHLFSHVRRL 324
            TFR +   D+ LLGYI+RV  LE+ NCHKLLNCIPSNMM LFSHV+ L
Sbjct: 1731 TFRDM---DEELLGYIKRVIVLEIVNCHKLLNCIPSNMMQLFSHVKSL 1775


>ref|XP_003588414.1| Nascent polypeptide-associated complex alpha subunit-like protein
            [Medicago truncatula] gi|355477462|gb|AES58665.1| Nascent
            polypeptide-associated complex alpha subunit-like protein
            [Medicago truncatula]
          Length = 1927

 Score =  122 bits (306), Expect = 3e-26
 Identities = 59/103 (57%), Positives = 78/103 (75%)
 Frame = +1

Query: 16   TFPHRNVIISTPNLDTVELWDDMMRFDVRTLGDVNLTIHYIQNEMEYKVELQELETFRGI 195
            TFP+  VI++TP+L T+    D +   V TLGD+NLTI+Y+QN  +Y VELQ+LETF+ +
Sbjct: 1516 TFPYGKVIVNTPSLRTLRWDKDGLLVAVNTLGDLNLTIYYVQNSKKYMVELQKLETFKDM 1575

Query: 196  EQRDQRLLGYIRRVRDLELENCHKLLNCIPSNMMHLFSHVRRL 324
               D+ LLGYI+RV  L++ NCHKLLNCIPSNMMHL SH+ +L
Sbjct: 1576 ---DEELLGYIKRVTHLDIVNCHKLLNCIPSNMMHLLSHLEKL 1615


>ref|XP_003613421.1| Disease resistance protein [Medicago truncatula]
            gi|355514756|gb|AES96379.1| Disease resistance protein
            [Medicago truncatula]
          Length = 1997

 Score =  117 bits (294), Expect = 7e-25
 Identities = 59/108 (54%), Positives = 79/108 (73%)
 Frame = +1

Query: 1    CPKIATFPHRNVIISTPNLDTVELWDDMMRFDVRTLGDVNLTIHYIQNEMEYKVELQELE 180
            CP +ATFP+ NVI+  PNL  V +WD      VRTL D+NLTI+Y QN  +YK E+Q+LE
Sbjct: 1616 CPNMATFPYGNVIVRAPNLHIV-MWD--WSKIVRTLEDLNLTIYYFQNSKKYKAEIQKLE 1672

Query: 181  TFRGIEQRDQRLLGYIRRVRDLELENCHKLLNCIPSNMMHLFSHVRRL 324
            TFR I   ++ L+ YIRRV  ++++ CHKLL+CIP+N MHLFSH++ L
Sbjct: 1673 TFRDI---NEELVAYIRRVTKIDIKKCHKLLSCIPANKMHLFSHMQIL 1717


>ref|XP_003624880.1| Disease resistance protein RPS2 [Medicago truncatula]
            gi|355499895|gb|AES81098.1| Disease resistance protein
            RPS2 [Medicago truncatula]
          Length = 1826

 Score =  112 bits (280), Expect = 3e-23
 Identities = 58/107 (54%), Positives = 78/107 (72%)
 Frame = +1

Query: 4    PKIATFPHRNVIISTPNLDTVELWDDMMRFDVRTLGDVNLTIHYIQNEMEYKVELQELET 183
            P   TFPH NV+++TP L  ++ W+   R  +  L D+NLTI+Y+QN  +YKVELQ+LET
Sbjct: 1539 PNTTTFPHGNVVVNTPILRKLD-WN---RIYIDALEDLNLTIYYLQNSKKYKVELQKLET 1594

Query: 184  FRGIEQRDQRLLGYIRRVRDLELENCHKLLNCIPSNMMHLFSHVRRL 324
            FR I   D+ L+GYI+RV +L++   +KLLNCIPSNMM LFSHV+ L
Sbjct: 1595 FRDI---DEELVGYIKRVTNLDIVKFNKLLNCIPSNMMQLFSHVKSL 1638


>ref|XP_003624881.1| Cc-nbs-lrr resistance protein [Medicago truncatula]
            gi|355499896|gb|AES81099.1| Cc-nbs-lrr resistance protein
            [Medicago truncatula]
          Length = 1338

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/60 (43%), Positives = 40/60 (66%)
 Frame = +1

Query: 1    CPKIATFPHRNVIISTPNLDTVELWDDMMRFDVRTLGDVNLTIHYIQNEMEYKVELQELE 180
            CP +    H NVI++TPNL    LW +    D++TLGD+NLTI+Y+ N  +YK++ + L+
Sbjct: 1220 CPNMTNLLHGNVIVNTPNLHN--LWWEWNWDDIQTLGDLNLTIYYLHNSEKYKMQFKNLK 1277


Top