BLASTX nr result

ID: Glycyrrhiza24_contig00031143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031143
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611420.1| Vacuolar protein sorting-associated protein ...   245   3e-63
ref|XP_003538761.1| PREDICTED: uncharacterized protein LOC100780...   235   3e-60
emb|CAN74191.1| hypothetical protein VITISV_019380 [Vitis vinifera]   181   5e-44
emb|CBI33975.3| unnamed protein product [Vitis vinifera]              181   7e-44
ref|XP_002326692.1| predicted protein [Populus trichocarpa] gi|2...   174   9e-42

>ref|XP_003611420.1| Vacuolar protein sorting-associated protein 13A [Medicago truncatula]
            gi|355512755|gb|AES94378.1| Vacuolar protein
            sorting-associated protein 13A [Medicago truncatula]
          Length = 4721

 Score =  245 bits (625), Expect = 3e-63
 Identities = 124/159 (77%), Positives = 133/159 (83%)
 Frame = -3

Query: 477  GLTQSSQYYLQLRPWTSANLYEYSWSSVVDRPRLSEDVVIAEKCSDXXXXXXXXXXXXXX 298
            GLTQS QY+LQLRP +S N YEYSWS+V DRPRLSEDV   E+CS+              
Sbjct: 3371 GLTQSIQYFLQLRPGSSENPYEYSWSTVTDRPRLSEDVGNGEQCSNLCVSALSESEELLY 3430

Query: 297  CTEMHGTSGGSHKLWFCVSIQATEIAKDMRSDAIQDWCLVVKSPLTISNFLPLAAEYSVL 118
            C+EMHGTSGGSHKLWFCVSIQATEIAKD+ SDAIQDWCLVVKSPLTISNFLPLAAEYSVL
Sbjct: 3431 CSEMHGTSGGSHKLWFCVSIQATEIAKDINSDAIQDWCLVVKSPLTISNFLPLAAEYSVL 3490

Query: 117  EMQSSGHFLACSRGVFLSGKTVQIYSADIRNPLFLSLLP 1
            EMQSSGHFL CSR VFLSG+TV+IYSADIR PLFLSLLP
Sbjct: 3491 EMQSSGHFLTCSRDVFLSGETVKIYSADIRKPLFLSLLP 3529


>ref|XP_003538761.1| PREDICTED: uncharacterized protein LOC100780088 [Glycine max]
          Length = 4246

 Score =  235 bits (599), Expect = 3e-60
 Identities = 122/159 (76%), Positives = 130/159 (81%)
 Frame = -3

Query: 477  GLTQSSQYYLQLRPWTSANLYEYSWSSVVDRPRLSEDVVIAEKCSDXXXXXXXXXXXXXX 298
            GLTQS QY+LQLRP  S N  EYSWSSVVDRPR  E++    +CS+              
Sbjct: 2948 GLTQSVQYFLQLRP--SENSCEYSWSSVVDRPRQPEEIGRGGQCSNLCVSALSESEELLC 3005

Query: 297  CTEMHGTSGGSHKLWFCVSIQATEIAKDMRSDAIQDWCLVVKSPLTISNFLPLAAEYSVL 118
            C+E+HGTSGGSHKLWFCVSIQATEIAKD+ SDAIQDWCLVVKSPL ISNFLPLAAEYSVL
Sbjct: 3006 CSEVHGTSGGSHKLWFCVSIQATEIAKDIHSDAIQDWCLVVKSPLIISNFLPLAAEYSVL 3065

Query: 117  EMQSSGHFLACSRGVFLSGKTVQIYSADIRNPLFLSLLP 1
            EMQSSGHFLACSRGVFLSGKTV IYSADIRNPLFLSLLP
Sbjct: 3066 EMQSSGHFLACSRGVFLSGKTVHIYSADIRNPLFLSLLP 3104


>emb|CAN74191.1| hypothetical protein VITISV_019380 [Vitis vinifera]
          Length = 1063

 Score =  181 bits (459), Expect = 5e-44
 Identities = 93/160 (58%), Positives = 113/160 (70%), Gaps = 1/160 (0%)
 Frame = -3

Query: 477 GLTQSSQYYLQLRPWTSANLYEYSWSSVVDRPRLSEDVVIAEKCSDXXXXXXXXXXXXXX 298
           GLTQS  YYLQLRP    N  EYSWSSV  RP   ED    ++ S+              
Sbjct: 334 GLTQSGLYYLQLRPSNLNNPDEYSWSSVAGRPGXPEDSGTPKEXSEICVSTLTESDELLC 393

Query: 297 CTEMHGTSGGSHK-LWFCVSIQATEIAKDMRSDAIQDWCLVVKSPLTISNFLPLAAEYSV 121
           C  ++GTS  S + LWFC+ IQAT+IAKD+RSD IQDW LVVKSPL+I+NFLP+AAE+SV
Sbjct: 394 CPPLNGTSSNSPRGLWFCLGIQATZIAKDIRSDPIQDWTLVVKSPLSITNFLPMAAEFSV 453

Query: 120 LEMQSSGHFLACSRGVFLSGKTVQIYSADIRNPLFLSLLP 1
            EMQ+SGH++ACSRG+F  GKTV++Y ADIRNPL+ SL P
Sbjct: 454 FEMQASGHYIACSRGIFGPGKTVRVYDADIRNPLYFSLFP 493


>emb|CBI33975.3| unnamed protein product [Vitis vinifera]
          Length = 2801

 Score =  181 bits (458), Expect = 7e-44
 Identities = 94/160 (58%), Positives = 113/160 (70%), Gaps = 1/160 (0%)
 Frame = -3

Query: 477  GLTQSSQYYLQLRPWTSANLYEYSWSSVVDRPRLSEDVVIAEKCSDXXXXXXXXXXXXXX 298
            GLTQS  YYLQLRP    N  EYSWSSV  RP   ED    ++ S+              
Sbjct: 1443 GLTQSGLYYLQLRPSNLNNPDEYSWSSVAGRPGRPEDSGTPKEYSEICVSTLTESDELLC 1502

Query: 297  CTEMHGTSGGSHK-LWFCVSIQATEIAKDMRSDAIQDWCLVVKSPLTISNFLPLAAEYSV 121
            C  ++GTS  S + LWFC+ IQATEIAKD+RSD IQDW LVVKSPL+I+NFLP+AAE+SV
Sbjct: 1503 CPPLNGTSSNSPRGLWFCLGIQATEIAKDIRSDPIQDWTLVVKSPLSITNFLPMAAEFSV 1562

Query: 120  LEMQSSGHFLACSRGVFLSGKTVQIYSADIRNPLFLSLLP 1
             EMQ+SGH++ACSRG+F  GKTV++Y ADIRNPL+ SL P
Sbjct: 1563 FEMQASGHYIACSRGIFGPGKTVRVYDADIRNPLYFSLFP 1602


>ref|XP_002326692.1| predicted protein [Populus trichocarpa] gi|222834014|gb|EEE72491.1|
            predicted protein [Populus trichocarpa]
          Length = 2827

 Score =  174 bits (440), Expect = 9e-42
 Identities = 95/159 (59%), Positives = 111/159 (69%), Gaps = 1/159 (0%)
 Frame = -3

Query: 474  LTQSSQYYLQLRPWTSANLYEYSWSSVVDRPRLSEDVVIAEKCSDXXXXXXXXXXXXXXC 295
            LTQS  Y LQL+P   +   EYSWS +VD+P   E      K S               C
Sbjct: 2420 LTQSGVYILQLKPSNVSTHDEYSWSYMVDKPGQPEGFG-EPKDSGICISSLTESEELLYC 2478

Query: 294  TEMHGTSG-GSHKLWFCVSIQATEIAKDMRSDAIQDWCLVVKSPLTISNFLPLAAEYSVL 118
            +++ GTS  GSHKLWFCVSIQATEIAKD+R D I+DWCLVVKSPLT SN LPLAAEYSVL
Sbjct: 2479 SQISGTSSKGSHKLWFCVSIQATEIAKDIRCDPIEDWCLVVKSPLTFSNCLPLAAEYSVL 2538

Query: 117  EMQSSGHFLACSRGVFLSGKTVQIYSADIRNPLFLSLLP 1
             MQ  GHF+AC+RGVF  G+TV++++ADIR PLFLSLLP
Sbjct: 2539 NMQPRGHFVACARGVFSPGETVKVHTADIRKPLFLSLLP 2577


Top