BLASTX nr result

ID: Glycyrrhiza24_contig00031136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031136
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550151.1| PREDICTED: replication protein A 32 kDa subu...   134   6e-30
gb|AAP58374.1| RPA 32kDa [Pisum sativum]                              132   2e-29
gb|AFK39825.1| unknown [Lotus japonicus]                              131   6e-29
ref|XP_003544637.1| PREDICTED: replication factor A protein 2-li...   128   5e-28
gb|ACU17707.1| unknown [Glycine max]                                  128   5e-28

>ref|XP_003550151.1| PREDICTED: replication protein A 32 kDa subunit-like [Glycine max]
          Length = 277

 Score =  134 bits (338), Expect = 6e-30
 Identities = 69/82 (84%), Positives = 72/82 (87%), Gaps = 2/82 (2%)
 Frame = -2

Query: 241 KSRETQCLVAVTVKQISEAS--GDENSNFVISGVSLTNVTLVGMVFEKADRTTDVNFVLD 68
           KSRETQ LV VTVKQISEAS  GDE SNFVI+GV L NVTL+GMVFEK +R TDVNFVLD
Sbjct: 35  KSRETQGLVPVTVKQISEASQSGDEKSNFVINGVDLNNVTLLGMVFEKVERNTDVNFVLD 94

Query: 67  DGTGRIKCRRWVNETFDTKEME 2
           DGTGRIKCRRWVNE FDTKEME
Sbjct: 95  DGTGRIKCRRWVNEAFDTKEME 116


>gb|AAP58374.1| RPA 32kDa [Pisum sativum]
          Length = 273

 Score =  132 bits (333), Expect = 2e-29
 Identities = 67/82 (81%), Positives = 73/82 (89%), Gaps = 2/82 (2%)
 Frame = -2

Query: 241 KSRETQCLVAVTVKQISEAS--GDENSNFVISGVSLTNVTLVGMVFEKADRTTDVNFVLD 68
           KSR++Q LV VTVKQISEAS  GDE SNF I+GV LTNVTLVGMV+EK +R TDVNFVLD
Sbjct: 32  KSRDSQGLVPVTVKQISEASQSGDEKSNFAINGVDLTNVTLVGMVYEKTERNTDVNFVLD 91

Query: 67  DGTGRIKCRRWVNETFDTKEME 2
           DGTGRIKCRRWVNETFD+KEME
Sbjct: 92  DGTGRIKCRRWVNETFDSKEME 113


>gb|AFK39825.1| unknown [Lotus japonicus]
          Length = 274

 Score =  131 bits (329), Expect = 6e-29
 Identities = 65/82 (79%), Positives = 74/82 (90%), Gaps = 2/82 (2%)
 Frame = -2

Query: 241 KSRETQCLVAVTVKQISEAS--GDENSNFVISGVSLTNVTLVGMVFEKADRTTDVNFVLD 68
           KSR+TQ LV VTV+QISEAS  GD+ SNFVI+GV LTNVTLVGMVFEK ++ T+VNFVLD
Sbjct: 36  KSRDTQGLVPVTVRQISEASHSGDDKSNFVINGVGLTNVTLVGMVFEKVEKNTEVNFVLD 95

Query: 67  DGTGRIKCRRWVNETFDTKEME 2
           DGTGRIKCRRWVNET+DTKEM+
Sbjct: 96  DGTGRIKCRRWVNETYDTKEMD 117


>ref|XP_003544637.1| PREDICTED: replication factor A protein 2-like [Glycine max]
          Length = 292

 Score =  128 bits (321), Expect = 5e-28
 Identities = 65/81 (80%), Positives = 70/81 (86%), Gaps = 2/81 (2%)
 Frame = -2

Query: 238 SRETQCLVAVTVKQISEAS--GDENSNFVISGVSLTNVTLVGMVFEKADRTTDVNFVLDD 65
           SRET  LV VTVKQISEAS  GDE SNFVI+GV L NVTLVGM+FEK +R TDV+FVLDD
Sbjct: 53  SRETPGLVPVTVKQISEASQSGDEKSNFVINGVDLNNVTLVGMMFEKVERNTDVSFVLDD 112

Query: 64  GTGRIKCRRWVNETFDTKEME 2
           GTGRIKCRRW+NE FDTKEME
Sbjct: 113 GTGRIKCRRWINEAFDTKEME 133


>gb|ACU17707.1| unknown [Glycine max]
          Length = 292

 Score =  128 bits (321), Expect = 5e-28
 Identities = 65/81 (80%), Positives = 70/81 (86%), Gaps = 2/81 (2%)
 Frame = -2

Query: 238 SRETQCLVAVTVKQISEAS--GDENSNFVISGVSLTNVTLVGMVFEKADRTTDVNFVLDD 65
           SRET  LV VTVKQISEAS  GDE SNFVI+GV L NVTLVGM+FEK +R TDV+FVLDD
Sbjct: 53  SRETPGLVPVTVKQISEASQSGDEKSNFVINGVDLNNVTLVGMMFEKVERNTDVSFVLDD 112

Query: 64  GTGRIKCRRWVNETFDTKEME 2
           GTGRIKCRRW+NE FDTKEME
Sbjct: 113 GTGRIKCRRWINEAFDTKEME 133


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