BLASTX nr result

ID: Glycyrrhiza24_contig00031118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031118
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003571789.1| PREDICTED: uncharacterized protein LOC100839...    58   9e-07
ref|XP_003593860.1| hypothetical protein MTR_2g018620 [Medicago ...    57   1e-06
ref|XP_002451200.1| hypothetical protein SORBIDRAFT_05g025720 [S...    57   2e-06
ref|XP_003576341.1| PREDICTED: uncharacterized protein LOC100830...    55   5e-06
gb|ABN08196.1| Polynucleotidyl transferase, Ribonuclease H fold ...    55   6e-06

>ref|XP_003571789.1| PREDICTED: uncharacterized protein LOC100839103 [Brachypodium
           distachyon]
          Length = 291

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
 Frame = +3

Query: 24  NFAVIYLVCTLWLIWKGRNQCVFKGKRPSPMATLMQIKVLTNDYVKLGLADT-QIRENHS 200
           +FAVI  + TLW IW  R + + + K  SP++T   I+    D   +    T + ++ H 
Sbjct: 65  DFAVI--LTTLWAIWWARRKAIHEDKYQSPLSTFTFIQRFFEDLSIVADEKTVEPKQLHG 122

Query: 201 TDSSHLS--QWRPPPRGWCKINTDASFHKSSKIGVFGVVVRDE 323
                L+  +W PPP G CKIN DA   +S   G    V RDE
Sbjct: 123 CKDKALAVPRWIPPPSGACKINVDAGLARSGAAGALDAVCRDE 165


>ref|XP_003593860.1| hypothetical protein MTR_2g018620 [Medicago truncatula]
           gi|355482908|gb|AES64111.1| hypothetical protein
           MTR_2g018620 [Medicago truncatula]
          Length = 221

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
 Frame = +3

Query: 42  LVCTLWLIWKGRNQCVFKGKRPSPMATLMQIKVLTNDYVKLGLADTQIRENH--STDSSH 215
           +   +W +W  RN  ++  KR +P +  + +  + N   +       I EN   S   + 
Sbjct: 77  MAMVIWSLWCNRNNIIWNNKRSTP-SQQVNVMGMANSLCEDWRLANYISENSLDSCSENP 135

Query: 216 LSQWRPPPRGWCKINTDASFHKSSKIGVFGVVVRDEMDTL 335
           +  W  PP GW K N DA FH    +   GV +RDE + L
Sbjct: 136 IQSWVKPPEGWLKCNVDAGFHPHQGVSSLGVCIRDEREFL 175


>ref|XP_002451200.1| hypothetical protein SORBIDRAFT_05g025720 [Sorghum bicolor]
           gi|241937043|gb|EES10188.1| hypothetical protein
           SORBIDRAFT_05g025720 [Sorghum bicolor]
          Length = 227

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/94 (35%), Positives = 42/94 (44%)
 Frame = +3

Query: 42  LVCTLWLIWKGRNQCVFKGKRPSPMATLMQIKVLTNDYVKLGLADTQIRENHSTDSSHLS 221
           ++C  W +W GRN      K   P AT   +  L  D   L LA               +
Sbjct: 8   IICGAWALWTGRNTRGHGRKSWEPGATARFVSKLLEDLASLKLAPVM------RPVPAEA 61

Query: 222 QWRPPPRGWCKINTDASFHKSSKIGVFGVVVRDE 323
           +W  P  GW KINTDA F + S  G  GVV+R+E
Sbjct: 62  KWEKPSLGWFKINTDAGFDQESNSGSAGVVIRNE 95


>ref|XP_003576341.1| PREDICTED: uncharacterized protein LOC100830352 [Brachypodium
           distachyon]
          Length = 265

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 36/103 (34%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
 Frame = +3

Query: 24  NFAVIYLVCTLWLIWKGRNQCVFKGKRPSPMATLMQIKVLTNDYVKLGLADT-QIRENHS 200
           NFAVI  + TLW IW  R + + + K  S ++T   I+    D   +    T + ++ H 
Sbjct: 65  NFAVI--LTTLWAIWWARRKAIHEDKYQSLLSTFTFIQRFLEDLSIVADEKTVEPKQLHG 122

Query: 201 TDSSHLS--QWRPPPRGWCKINTDASFHKSSKIGVFGVVVRDE 323
                L+  +W PPP G CKIN DA   +S   G    V RDE
Sbjct: 123 CKDKALAVPRWIPPPSGACKINVDAGLARSGAGGALAAVCRDE 165


>gb|ABN08196.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 110

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
 Frame = +3

Query: 48  CTLWLIWKGRNQCVFKGKRPSPMATLMQIKVLTNDYVKLGLADTQIRENHSTDSSHLSQW 227
           C LW IWK RN  V+ G   + +  L + KVL  D+        Q   +   +++  S+W
Sbjct: 12  CILWSIWKQRNNKVWNGVIEAQVVVLERAKVLLQDW--RAAKSYQQHSSRIQNTADSSKW 69

Query: 228 RPPPRGWCKINTDASFHKS-SKIGVFGVVVRDEMDT 332
           + P  G  K N DASF K  +K+G+ G+ +RD+  T
Sbjct: 70  KKPTVGQYKCNIDASFSKHLNKVGI-GICIRDDTGT 104


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