BLASTX nr result

ID: Glycyrrhiza24_contig00031108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031108
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588487.1| WD repeat-containing protein [Medicago trunc...    76   2e-12
ref|XP_003527990.1| PREDICTED: uncharacterized protein LOC100817...    70   1e-10
ref|XP_003522540.1| PREDICTED: uncharacterized protein LOC100807...    70   2e-10
emb|CBI23039.3| unnamed protein product [Vitis vinifera]               55   6e-06
ref|XP_002271917.1| PREDICTED: uncharacterized protein LOC100245...    55   6e-06

>ref|XP_003588487.1| WD repeat-containing protein [Medicago truncatula]
           gi|358344639|ref|XP_003636395.1| WD repeat-containing
           protein [Medicago truncatula]
           gi|355477535|gb|AES58738.1| WD repeat-containing protein
           [Medicago truncatula] gi|355502330|gb|AES83533.1| WD
           repeat-containing protein [Medicago truncatula]
          Length = 784

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 47/103 (45%), Positives = 58/103 (56%)
 Frame = +2

Query: 23  EDSENNASGVSPLVGREFEEKDDADGVTXXXXXXXXXXXXXXXXSMTCMIDRQGGEGCDD 202
           ++S N A   S     EF E+ +  GV                 SMTCM+D Q GE   D
Sbjct: 159 DESVNAAEVSSTSYQHEFGEEFEETGVFEPWTKRVKKSWLRKLRSMTCMMDVQQGES--D 216

Query: 203 NGKQEGGICAAISGCRLQKVKVRQCRKQTKELSALYLRQDIQA 331
           N K E G+  + S CR+Q+VKVRQC+KQ KELSALY+ QDIQA
Sbjct: 217 NRKHEDGV--SFSDCRIQRVKVRQCKKQRKELSALYMGQDIQA 257


>ref|XP_003527990.1| PREDICTED: uncharacterized protein LOC100817209 [Glycine max]
          Length = 701

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 51/110 (46%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
 Frame = +2

Query: 5   VVAKEHEDSENNASGVSPLVGREFEEKDDADGVTXXXXXXXXXXXXXXXXSMTCMIDRQG 184
           VVA+EH++SEN            F E D    V+                S+TCM++RQ 
Sbjct: 158 VVAEEHKESEN-----------AFRETDA--NVSVGKMNKYKKGWLRRLRSITCMLNRQD 204

Query: 185 GEGCDDNGKQEGGICAAISG-CRLQKVKVRQCRKQTKELSALYLRQDIQA 331
            EG  DNG++EG     +SG CRLQKVKVRQ +KQ KELSALY+RQD QA
Sbjct: 205 -EG--DNGREEG--LGEMSGTCRLQKVKVRQSKKQMKELSALYIRQDFQA 249


>ref|XP_003522540.1| PREDICTED: uncharacterized protein LOC100807177 [Glycine max]
          Length = 703

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 50/110 (45%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
 Frame = +2

Query: 5   VVAKEHEDSENNASGVSPLVGREFEEKDDADGVTXXXXXXXXXXXXXXXXSMTCMIDRQG 184
           VVA+E ++SEN   G +               VT                S+TCM++RQ 
Sbjct: 160 VVAEEFKESENALRGTN-------------GNVTVGKMNKYRKGWLRRLRSITCMVNRQE 206

Query: 185 GEGCDDNGKQEGGICAAISG-CRLQKVKVRQCRKQTKELSALYLRQDIQA 331
            EG  DNG++EG     +SG CRLQKVKVRQ +KQ KELSALY+RQDIQA
Sbjct: 207 -EG--DNGREEG--LGEMSGTCRLQKVKVRQSKKQMKELSALYMRQDIQA 251


>emb|CBI23039.3| unnamed protein product [Vitis vinifera]
          Length = 674

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 38/98 (38%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
 Frame = +2

Query: 41  ASGVSPLVGREFEEKDDADGVTXXXXXXXXXXXXXXXXSMTCMIDRQGG-EGCDDNGKQE 217
           +S V  ++ RE EE  +  G                  SM+C++DR G       N    
Sbjct: 134 SSSVQQVIQREIEEASNPVGAAKRVKKGWLSRLR----SMSCIMDRHGEIHNLTTNDTNP 189

Query: 218 GGICAAISGCRLQKVKVRQCRKQTKELSALYLRQDIQA 331
                 I G R+Q+V+VRQCRKQ KELSALY  QDIQA
Sbjct: 190 ------IPGARIQRVRVRQCRKQMKELSALYKGQDIQA 221


>ref|XP_002271917.1| PREDICTED: uncharacterized protein LOC100245187 [Vitis vinifera]
          Length = 731

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 38/98 (38%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
 Frame = +2

Query: 41  ASGVSPLVGREFEEKDDADGVTXXXXXXXXXXXXXXXXSMTCMIDRQGG-EGCDDNGKQE 217
           +S V  ++ RE EE  +  G                  SM+C++DR G       N    
Sbjct: 191 SSSVQQVIQREIEEASNPVGAAKRVKKGWLSRLR----SMSCIMDRHGEIHNLTTNDTNP 246

Query: 218 GGICAAISGCRLQKVKVRQCRKQTKELSALYLRQDIQA 331
                 I G R+Q+V+VRQCRKQ KELSALY  QDIQA
Sbjct: 247 ------IPGARIQRVRVRQCRKQMKELSALYKGQDIQA 278


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