BLASTX nr result

ID: Glycyrrhiza24_contig00031103 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031103
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003619828.1| Pentatricopeptide repeat-containing protein ...   149   2e-34
emb|CBI18867.3| unnamed protein product [Vitis vinifera]              119   3e-25
gb|AAF17637.1|AC009978_13 T23E18.21 [Arabidopsis thaliana]            112   4e-23
gb|AAF16672.1|AC012394_21 hypothetical protein; 84465-87513 [Ara...   112   4e-23
ref|NP_001185409.1| pentatricopeptide repeat-containing protein ...   112   4e-23

>ref|XP_003619828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355494843|gb|AES76046.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 895

 Score =  149 bits (377), Expect = 2e-34
 Identities = 75/91 (82%), Positives = 84/91 (92%)
 Frame = -1

Query: 275 LAWKLILQMQNLGLQPSSHTYDCIIRAVVSQRSFGDAMGVLQKMQQENLKPYDSTLATLS 96
           LAWKLILQMQ+LGLQPSSHTY+ +IRA+VSQR FGDAM +L+KMQQENLK  DSTLATLS
Sbjct: 379 LAWKLILQMQSLGLQPSSHTYNGLIRAIVSQRRFGDAMRMLKKMQQENLKLVDSTLATLS 438

Query: 95  VTCSKKLQLDLAESLLNQISECLHPHPYNAL 3
           V  S++LQLDLAESLLNQISECL+PHPYNAL
Sbjct: 439 VAFSRELQLDLAESLLNQISECLYPHPYNAL 469


>emb|CBI18867.3| unnamed protein product [Vitis vinifera]
          Length = 804

 Score =  119 bits (298), Expect = 3e-25
 Identities = 61/90 (67%), Positives = 71/90 (78%)
 Frame = -1

Query: 275 LAWKLILQMQNLGLQPSSHTYDCIIRAVVSQRSFGDAMGVLQKMQQENLKPYDSTLATLS 96
           LA +LILQMQNLGL+PS HTYD +I+A+VS R F D M VL+ MQ  NLKPYDSTLA LS
Sbjct: 346 LAEQLILQMQNLGLEPSCHTYDGLIKAIVSDRGFSDGMEVLKTMQLRNLKPYDSTLAALS 405

Query: 95  VTCSKKLQLDLAESLLNQISECLHPHPYNA 6
           +  SK LQLDLAESLL+QIS   + HP+NA
Sbjct: 406 IGSSKALQLDLAESLLDQISRISYVHPFNA 435


>gb|AAF17637.1|AC009978_13 T23E18.21 [Arabidopsis thaliana]
          Length = 800

 Score =  112 bits (279), Expect = 4e-23
 Identities = 57/91 (62%), Positives = 70/91 (76%)
 Frame = -1

Query: 275 LAWKLILQMQNLGLQPSSHTYDCIIRAVVSQRSFGDAMGVLQKMQQENLKPYDSTLATLS 96
           LA +L+LQMQNLGL PSSHTYD  IRAV     +   M +L+ MQQ+NLKPYDSTLAT++
Sbjct: 303 LAEQLMLQMQNLGLLPSSHTYDGFIRAVAFPEGYEYGMTLLKVMQQQNLKPYDSTLATVA 362

Query: 95  VTCSKKLQLDLAESLLNQISECLHPHPYNAL 3
             CSK LQ+DLAE LL+QISEC + +P+N L
Sbjct: 363 AYCSKALQVDLAEHLLDQISECSYSYPFNNL 393


>gb|AAF16672.1|AC012394_21 hypothetical protein; 84465-87513 [Arabidopsis thaliana]
          Length = 558

 Score =  112 bits (279), Expect = 4e-23
 Identities = 57/91 (62%), Positives = 70/91 (76%)
 Frame = -1

Query: 275 LAWKLILQMQNLGLQPSSHTYDCIIRAVVSQRSFGDAMGVLQKMQQENLKPYDSTLATLS 96
           LA +L+LQMQNLGL PSSHTYD  IRAV     +   M +L+ MQQ+NLKPYDSTLAT++
Sbjct: 90  LAEQLMLQMQNLGLLPSSHTYDGFIRAVAFPEGYEYGMTLLKVMQQQNLKPYDSTLATVA 149

Query: 95  VTCSKKLQLDLAESLLNQISECLHPHPYNAL 3
             CSK LQ+DLAE LL+QISEC + +P+N L
Sbjct: 150 AYCSKALQVDLAEHLLDQISECSYSYPFNNL 180


>ref|NP_001185409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|332197699|gb|AEE35820.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 801

 Score =  112 bits (279), Expect = 4e-23
 Identities = 57/91 (62%), Positives = 70/91 (76%)
 Frame = -1

Query: 275 LAWKLILQMQNLGLQPSSHTYDCIIRAVVSQRSFGDAMGVLQKMQQENLKPYDSTLATLS 96
           LA +L+LQMQNLGL PSSHTYD  IRAV     +   M +L+ MQQ+NLKPYDSTLAT++
Sbjct: 347 LAEQLMLQMQNLGLLPSSHTYDGFIRAVAFPEGYEYGMTLLKVMQQQNLKPYDSTLATVA 406

Query: 95  VTCSKKLQLDLAESLLNQISECLHPHPYNAL 3
             CSK LQ+DLAE LL+QISEC + +P+N L
Sbjct: 407 AYCSKALQVDLAEHLLDQISECSYSYPFNNL 437


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