BLASTX nr result

ID: Glycyrrhiza24_contig00031084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031084
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556580.1| PREDICTED: ATP-dependent DNA helicase 2 subu...   182   2e-44
gb|AAT48365.1| Ku70-like protein [Vigna radiata]                      177   8e-43
ref|XP_002267875.1| PREDICTED: ATP-dependent DNA helicase 2 subu...   151   6e-35
ref|XP_002317447.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
ref|XP_002521532.1| ku P70 DNA helicase, putative [Ricinus commu...   150   1e-34

>ref|XP_003556580.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU70-like [Glycine
           max]
          Length = 633

 Score =  182 bits (463), Expect = 2e-44
 Identities = 93/114 (81%), Positives = 97/114 (85%)
 Frame = -1

Query: 469 PEMKDETLPDEEGLARTGVVRALEEFKNSVXXXXXXXXXXXGIGKPTEASKKRKAHAEFA 290
           PEMKDE+LPDEEGLAR GVVRALEEFK SV           G  KPTEASKKRKA+AEFA
Sbjct: 520 PEMKDESLPDEEGLARPGVVRALEEFKTSVYGDNYDEENEPGTEKPTEASKKRKANAEFA 579

Query: 289 VKECENYDWGELADTGKLKDLTVVELKYYLTAHNLPVSGKKEALISRILTHMGK 128
            KECENYDWG+LADTGKLKDLTVVELKYYLTAHNLPVSGKKEA+ISRILTHM K
Sbjct: 580 TKECENYDWGDLADTGKLKDLTVVELKYYLTAHNLPVSGKKEAIISRILTHMAK 633


>gb|AAT48365.1| Ku70-like protein [Vigna radiata]
          Length = 629

 Score =  177 bits (449), Expect = 8e-43
 Identities = 89/114 (78%), Positives = 94/114 (82%)
 Frame = -1

Query: 469 PEMKDETLPDEEGLARTGVVRALEEFKNSVXXXXXXXXXXXGIGKPTEASKKRKAHAEFA 290
           PEMKDETLPDEEGL R GVVRA+EEFK S+           GIGKPTEASKKRKA  EFA
Sbjct: 516 PEMKDETLPDEEGLTRPGVVRAVEEFKTSIYGDNYDEQNEHGIGKPTEASKKRKAMLEFA 575

Query: 289 VKECENYDWGELADTGKLKDLTVVELKYYLTAHNLPVSGKKEALISRILTHMGK 128
             EC+ YDWGELADTGKLKDLTVVELKYYLTAHNLPVSGKKEA+ISRI +HMGK
Sbjct: 576 TTECKQYDWGELADTGKLKDLTVVELKYYLTAHNLPVSGKKEAIISRIFSHMGK 629


>ref|XP_002267875.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU70 [Vitis
           vinifera] gi|296089629|emb|CBI39448.3| unnamed protein
           product [Vitis vinifera]
          Length = 623

 Score =  151 bits (381), Expect = 6e-35
 Identities = 80/114 (70%), Positives = 86/114 (75%)
 Frame = -1

Query: 469 PEMKDETLPDEEGLARTGVVRALEEFKNSVXXXXXXXXXXXGIGKPTEASKKRKAHAEFA 290
           PE+KDETLPDEEG+AR GVV ALEEFK SV             GK ++ASKKRKA AE A
Sbjct: 511 PEIKDETLPDEEGMARPGVVNALEEFKKSVYGENYNEEDEGH-GKASDASKKRKAVAENA 569

Query: 289 VKECENYDWGELADTGKLKDLTVVELKYYLTAHNLPVSGKKEALISRILTHMGK 128
           VKE   YDW +LAD G+LKDLT VELKYYLTAHNL V GKKE LISRILTHMGK
Sbjct: 570 VKESAKYDWADLADNGRLKDLTTVELKYYLTAHNLAVGGKKEVLISRILTHMGK 623


>ref|XP_002317447.1| predicted protein [Populus trichocarpa] gi|222860512|gb|EEE98059.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score =  150 bits (379), Expect = 1e-34
 Identities = 77/114 (67%), Positives = 88/114 (77%)
 Frame = -1

Query: 469 PEMKDETLPDEEGLARTGVVRALEEFKNSVXXXXXXXXXXXGIGKPTEASKKRKAHAEFA 290
           PE+ DETLPDEEG+AR GVV+A+EEFK SV           G GK ++ASKKRK  AE A
Sbjct: 515 PEINDETLPDEEGMARPGVVKAVEEFKLSVYGENYDEESDMGSGKASDASKKRKTAAENA 574

Query: 289 VKECENYDWGELADTGKLKDLTVVELKYYLTAHNLPVSGKKEALISRILTHMGK 128
            KE  NY+W +LAD G+LKDLTV ELKYYLTAHNLPV+GKKE LISRILTH+GK
Sbjct: 575 AKESANYNWPDLADNGQLKDLTVTELKYYLTAHNLPVTGKKEVLISRILTHLGK 628


>ref|XP_002521532.1| ku P70 DNA helicase, putative [Ricinus communis]
           gi|223539210|gb|EEF40803.1| ku P70 DNA helicase,
           putative [Ricinus communis]
          Length = 626

 Score =  150 bits (378), Expect = 1e-34
 Identities = 78/114 (68%), Positives = 86/114 (75%)
 Frame = -1

Query: 469 PEMKDETLPDEEGLARTGVVRALEEFKNSVXXXXXXXXXXXGIGKPTEASKKRKAHAEFA 290
           PE KDETLPDEEGLAR GVV+A+EEFK SV           G GK  E S+KRKA AE A
Sbjct: 513 PESKDETLPDEEGLARPGVVKAIEEFKLSVYGDKYDEENLLGNGKANETSRKRKAAAENA 572

Query: 289 VKECENYDWGELADTGKLKDLTVVELKYYLTAHNLPVSGKKEALISRILTHMGK 128
             E  NYDW +LAD GKLKDLTV ELK YLTAHN+PV+GKKEALIS+ILTH+GK
Sbjct: 573 KNESANYDWADLADNGKLKDLTVAELKLYLTAHNIPVAGKKEALISKILTHLGK 626


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