BLASTX nr result

ID: Glycyrrhiza24_contig00031063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031063
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609141.1| G patch domain-containing protein [Medicago ...   136   2e-30
ref|XP_002318558.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25
ref|XP_003525636.1| PREDICTED: G patch domain-containing protein...   116   2e-24
ref|XP_002511999.1| RNA binding protein, putative [Ricinus commu...   116   2e-24
emb|CBI15390.3| unnamed protein product [Vitis vinifera]              103   1e-20

>ref|XP_003609141.1| G patch domain-containing protein [Medicago truncatula]
           gi|355510196|gb|AES91338.1| G patch domain-containing
           protein [Medicago truncatula]
          Length = 819

 Score =  136 bits (343), Expect = 2e-30
 Identities = 73/126 (57%), Positives = 76/126 (60%), Gaps = 1/126 (0%)
 Frame = +2

Query: 2   VYVLNPKEDLYGLGFDPYKHAPXXXXXXXXXXXXXXXXXHSKNLSIRDSLFGSKSGKAAP 181
           VYVLNPK+DLYGLGFDPYKHAP                 HSK  S RDSLFG KSGKAAP
Sbjct: 62  VYVLNPKQDLYGLGFDPYKHAPEFREMKRSRPSSKTGSGHSKKFSARDSLFGFKSGKAAP 121

Query: 182 GFGIGXXXXXXXXXXXVYCTSFEFEDAYVQ-EVEEPSKLTLENXXXXXXXXXGNLPGLRV 358
           GFGIG           VY T +E EDAYVQ E+EEPS LTLE          GNLPG R 
Sbjct: 122 GFGIGALEELDAEDEDVYATGYEIEDAYVQEEIEEPSMLTLEKPKKEDQKDQGNLPGFRA 181

Query: 359 ASASDY 376
           AS SDY
Sbjct: 182 ASNSDY 187


>ref|XP_002318558.1| predicted protein [Populus trichocarpa] gi|222859231|gb|EEE96778.1|
           predicted protein [Populus trichocarpa]
          Length = 965

 Score =  118 bits (296), Expect = 4e-25
 Identities = 60/125 (48%), Positives = 73/125 (58%)
 Frame = +2

Query: 2   VYVLNPKEDLYGLGFDPYKHAPXXXXXXXXXXXXXXXXXHSKNLSIRDSLFGSKSGKAAP 181
           VY+LNPKED +GLG+DPYKHAP                 + + LSI+DSLFG KSG+AAP
Sbjct: 240 VYILNPKEDTHGLGYDPYKHAPEFREKKRTRVSGKRGSGNKQALSIKDSLFGLKSGRAAP 299

Query: 182 GFGIGXXXXXXXXXXXVYCTSFEFEDAYVQEVEEPSKLTLENXXXXXXXXXGNLPGLRVA 361
           GFGIG           VY T+++ ED Y+QE EEP +   EN         G LPG +VA
Sbjct: 300 GFGIGALEDYDAEDEDVYATAYDIEDTYIQEDEEPLRSNTENKPKLVWKEQGVLPGFKVA 359

Query: 362 SASDY 376
           S SDY
Sbjct: 360 SNSDY 364


>ref|XP_003525636.1| PREDICTED: G patch domain-containing protein 1-like [Glycine max]
          Length = 1014

 Score =  116 bits (291), Expect = 2e-24
 Identities = 69/140 (49%), Positives = 74/140 (52%), Gaps = 15/140 (10%)
 Frame = +2

Query: 2   VYVLNPKEDLYGLGFDPYKHAPXXXXXXXXXXXXXXXXXHSKNLSIRDSLFGSKSGKAAP 181
           VYVLNPK+DL+GLGFDPYKHAP                      S RD LFG KSGKAAP
Sbjct: 239 VYVLNPKQDLHGLGFDPYKHAPEFREKKRSRLASKG----GPGFSTRDGLFGLKSGKAAP 294

Query: 182 GFGIGXXXXXXXXXXXVYCTSFEFEDAYVQ---------------EVEEPSKLTLENXXX 316
           GFGIG           VY T +EFEDAYVQ               EVEEPS L LE+   
Sbjct: 295 GFGIGALEELDAEDEDVYATGYEFEDAYVQEVEEPLTLRLENQRKEVEEPSTLRLESHRK 354

Query: 317 XXXXXXGNLPGLRVASASDY 376
                 G+LPG RVAS SDY
Sbjct: 355 KEQKDQGDLPGFRVASNSDY 374


>ref|XP_002511999.1| RNA binding protein, putative [Ricinus communis]
           gi|223549179|gb|EEF50668.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 1000

 Score =  116 bits (291), Expect = 2e-24
 Identities = 59/125 (47%), Positives = 76/125 (60%)
 Frame = +2

Query: 2   VYVLNPKEDLYGLGFDPYKHAPXXXXXXXXXXXXXXXXXHSKNLSIRDSLFGSKSGKAAP 181
           V+VLNPK+DLYGLG+DPYKHAP                 + K L +RD LFG KSGKAAP
Sbjct: 238 VFVLNPKQDLYGLGYDPYKHAPEFREKKRSRVSDNREPGNRKALLMRDGLFGFKSGKAAP 297

Query: 182 GFGIGXXXXXXXXXXXVYCTSFEFEDAYVQEVEEPSKLTLENXXXXXXXXXGNLPGLRVA 361
           GFGIG           +Y T+++FE+  V+EVEEP++++ ++         G LPG RVA
Sbjct: 298 GFGIGALEEYDAEDEDLYGTAYDFEETCVEEVEEPARISTDHKQKLVWKEQGVLPGFRVA 357

Query: 362 SASDY 376
           S SDY
Sbjct: 358 SNSDY 362


>emb|CBI15390.3| unnamed protein product [Vitis vinifera]
          Length = 944

 Score =  103 bits (257), Expect = 1e-20
 Identities = 55/125 (44%), Positives = 69/125 (55%)
 Frame = +2

Query: 2   VYVLNPKEDLYGLGFDPYKHAPXXXXXXXXXXXXXXXXXHSKNLSIRDSLFGSKSGKAAP 181
           VYVLNPK+DL+GLG+DP+KHAP                   K L +++ LF  KS K AP
Sbjct: 239 VYVLNPKQDLHGLGYDPFKHAPEFREKKRLRMSG------KKELGLKNDLFAFKSRKVAP 292

Query: 182 GFGIGXXXXXXXXXXXVYCTSFEFEDAYVQEVEEPSKLTLENXXXXXXXXXGNLPGLRVA 361
           GFGIG           VY + ++FED Y+QEVEEPS L +E+         G L G +VA
Sbjct: 293 GFGIGALEELDVEDEDVYASGYDFEDNYIQEVEEPSGLVIESKQKLGSKEKGVLSGFKVA 352

Query: 362 SASDY 376
           S  DY
Sbjct: 353 SKLDY 357


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