BLASTX nr result

ID: Glycyrrhiza24_contig00031059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031059
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616296.1| DNA repair protein complementing XP-C cells-...   218   4e-55
ref|XP_003544368.1| PREDICTED: uncharacterized protein LOC100818...   202   3e-50
ref|XP_002305874.1| predicted protein [Populus trichocarpa] gi|2...   156   2e-36
ref|XP_004140360.1| PREDICTED: DNA repair protein complementing ...   147   9e-34
ref|XP_004155756.1| PREDICTED: DNA repair protein complementing ...   145   3e-33

>ref|XP_003616296.1| DNA repair protein complementing XP-C cells-like protein [Medicago
            truncatula] gi|355517631|gb|AES99254.1| DNA repair
            protein complementing XP-C cells-like protein [Medicago
            truncatula]
          Length = 1052

 Score =  218 bits (555), Expect = 4e-55
 Identities = 108/156 (69%), Positives = 126/156 (80%)
 Frame = +3

Query: 3    RFPRAYSVAKRLEIDYAPAMVGFEFKNGRSYPVYDGIVVCAEFKDVLLEAYAEEHERQQA 182
            RF  AYSVAKRLEID APAMVGFEFKNGR++PVY+GIVVCAEFKD+LLEA+AEE ER++A
Sbjct: 872  RFRSAYSVAKRLEIDSAPAMVGFEFKNGRAHPVYNGIVVCAEFKDILLEAFAEEDEREKA 931

Query: 183  EEKRRDEAQALKRWYQLLSSIVTRQXXXXXXXXXXXXEMSTRVECMNENVSNNTVCGSYD 362
            EEK+RDE +AL+RWYQLLSSIVTRQ            E+S  V C+N+ VSN T+ GS D
Sbjct: 932  EEKKRDETEALRRWYQLLSSIVTRQRLNNRYNNSLTPEVSNDVHCVNDKVSNATIFGSSD 991

Query: 363  KNQTPPIHHHVNKCDTDLDASLSAPVKDHMHVFLKE 470
            K+QTP  HH ++KCDTDLD S+S PVKDH HVFLKE
Sbjct: 992  KSQTPR-HHQIDKCDTDLDVSVSIPVKDHEHVFLKE 1026


>ref|XP_003544368.1| PREDICTED: uncharacterized protein LOC100818100 [Glycine max]
          Length = 926

 Score =  202 bits (513), Expect = 3e-50
 Identities = 106/157 (67%), Positives = 120/157 (76%), Gaps = 1/157 (0%)
 Frame = +3

Query: 3    RFPRAYSVAKRLEIDYAPAMVGFEFKNGRSYPVYDGIVVCAEFKDVLLEAYAEEHERQQA 182
            RFP+A+SVAKRLEIDYAPAMVGFEFKNGRSYPV+DGIVVCAEFKDVLLEAYAEE ER+QA
Sbjct: 745  RFPKAFSVAKRLEIDYAPAMVGFEFKNGRSYPVFDGIVVCAEFKDVLLEAYAEEEERRQA 804

Query: 183  EEKRRDEAQALKRWYQLLSSIVTRQ-XXXXXXXXXXXXEMSTRVECMNENVSNNTVCGSY 359
            EEK+RDE QAL RWYQLLSSIVTRQ             +  T V C+N + S+ TVC + 
Sbjct: 805  EEKKRDETQALSRWYQLLSSIVTRQRLNNRYINNSLSSDKLTGVLCINNDESSATVCDNN 864

Query: 360  DKNQTPPIHHHVNKCDTDLDASLSAPVKDHMHVFLKE 470
            DK+        V+KCDT++D SLS  VKDH HVFLKE
Sbjct: 865  DKSPNQR-DQQVDKCDTNVDVSLSTSVKDHEHVFLKE 900


>ref|XP_002305874.1| predicted protein [Populus trichocarpa] gi|222848838|gb|EEE86385.1|
            predicted protein [Populus trichocarpa]
          Length = 868

 Score =  156 bits (394), Expect = 2e-36
 Identities = 86/156 (55%), Positives = 101/156 (64%)
 Frame = +3

Query: 3    RFPRAYSVAKRLEIDYAPAMVGFEFKNGRSYPVYDGIVVCAEFKDVLLEAYAEEHERQQA 182
            R PR + VAKRLEIDYAPAMVGFEF+NGRS PV+DGIVVC EFKD +LEAYAEE ER+ A
Sbjct: 694  RLPRVFYVAKRLEIDYAPAMVGFEFRNGRSVPVFDGIVVCNEFKDAILEAYAEEEERRDA 753

Query: 183  EEKRRDEAQALKRWYQLLSSIVTRQXXXXXXXXXXXXEMSTRVECMNENVSNNTVCGSYD 362
            EEK+R+EAQA+ RWYQLLSSI+TRQ            +M + V+  N N   +   GS  
Sbjct: 754  EEKKRNEAQAISRWYQLLSSIITRQRLNNSYGNGLLPQMPSNVQ--NTNNQPDVHVGS-- 809

Query: 363  KNQTPPIHHHVNKCDTDLDASLSAPVKDHMHVFLKE 470
               T P  H  +  D  L+A       DH HVFL E
Sbjct: 810  ---TQPPGHQKDAKDRKLNAPSMTLTDDHEHVFLVE 842


>ref|XP_004140360.1| PREDICTED: DNA repair protein complementing XP-C cells-like [Cucumis
            sativus]
          Length = 923

 Score =  147 bits (371), Expect = 9e-34
 Identities = 82/156 (52%), Positives = 100/156 (64%)
 Frame = +3

Query: 3    RFPRAYSVAKRLEIDYAPAMVGFEFKNGRSYPVYDGIVVCAEFKDVLLEAYAEEHERQQA 182
            R PR +SVAK+LEIDYAPAMVGFEF+NGRSYP+YDGIVVC+EFKDV+LE Y EE ER +A
Sbjct: 744  RLPRVFSVAKKLEIDYAPAMVGFEFRNGRSYPIYDGIVVCSEFKDVILETYNEEAERMEA 803

Query: 183  EEKRRDEAQALKRWYQLLSSIVTRQXXXXXXXXXXXXEMSTRVECMNENVSNNTVCGSYD 362
            EE+R  E QA+ RWYQLLSSI+TRQ               T  +  N +   N    S  
Sbjct: 804  EERRLREKQAISRWYQLLSSIITRQRLNSRYGDSENLSQVTS-DIRNMHDERNADVPSCQ 862

Query: 363  KNQTPPIHHHVNKCDTDLDASLSAPVKDHMHVFLKE 470
            ++  P      N  +T++DA  S   +DH HVFL E
Sbjct: 863  EDVEPFKGQPDNLSNTNMDAP-SFINQDHKHVFLLE 897


>ref|XP_004155756.1| PREDICTED: DNA repair protein complementing XP-C cells-like [Cucumis
            sativus]
          Length = 923

 Score =  145 bits (366), Expect = 3e-33
 Identities = 81/156 (51%), Positives = 100/156 (64%)
 Frame = +3

Query: 3    RFPRAYSVAKRLEIDYAPAMVGFEFKNGRSYPVYDGIVVCAEFKDVLLEAYAEEHERQQA 182
            R PR +SVAK+LEIDYAPAMVGFEF+NGRSYP+YDGIVVC+EFKDV+LE Y EE ER +A
Sbjct: 744  RLPRVFSVAKKLEIDYAPAMVGFEFRNGRSYPIYDGIVVCSEFKDVILETYNEEAERMEA 803

Query: 183  EEKRRDEAQALKRWYQLLSSIVTRQXXXXXXXXXXXXEMSTRVECMNENVSNNTVCGSYD 362
            EE+R  E QA+ RWYQLLSSI+TRQ               T  +  + +   N    S  
Sbjct: 804  EERRLREKQAISRWYQLLSSIITRQRLNSRYGDSENLSQVTS-DIRDMHDERNADVPSCQ 862

Query: 363  KNQTPPIHHHVNKCDTDLDASLSAPVKDHMHVFLKE 470
            ++  P      N  +T++DA  S   +DH HVFL E
Sbjct: 863  EDVEPFKGQPDNLSNTNMDAP-SFINQDHKHVFLLE 897