BLASTX nr result

ID: Glycyrrhiza24_contig00031051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031051
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549326.1| PREDICTED: transcription initiation factor T...   156   1e-36
ref|XP_003526182.1| PREDICTED: transcription initiation factor T...   131   5e-29
ref|XP_003522395.1| PREDICTED: transcription initiation factor T...   131   5e-29
ref|XP_003603301.1| Transcription initiation factor TFIID subuni...   120   1e-25
ref|XP_003631761.1| PREDICTED: transcription initiation factor T...   114   6e-24

>ref|XP_003549326.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
           [Glycine max]
          Length = 657

 Score =  156 bits (395), Expect = 1e-36
 Identities = 76/97 (78%), Positives = 86/97 (88%)
 Frame = +1

Query: 1   VSGYLKEKGFTQNAEELQHSSSNNNDSSLQHDTLNRTQLERDNARYHDGYGRLRSWAYRS 180
           VSGYLK+KGFTQN ++LQ +   N DSSLQ DTLNR QLER +ARYHDGYGRLRSWAYRS
Sbjct: 10  VSGYLKQKGFTQNDDQLQLT---NTDSSLQPDTLNRAQLERGSARYHDGYGRLRSWAYRS 66

Query: 181 LDSYKNELLRVLYPVFVHCFMDLVEKGHLQEARNFFN 291
           LDSYK+ELLRVL+P+F+HCFMDLV KG+LQEA NFFN
Sbjct: 67  LDSYKHELLRVLFPLFIHCFMDLVAKGNLQEAWNFFN 103


>ref|XP_003526182.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
           [Glycine max]
          Length = 663

 Score =  131 bits (330), Expect = 5e-29
 Identities = 65/105 (61%), Positives = 78/105 (74%), Gaps = 8/105 (7%)
 Frame = +1

Query: 1   VSGYLKEKGFTQNA----EELQHSSSNNNDSSLQHDTLNR----TQLERDNARYHDGYGR 156
           V+ +LK+KGFTQ      EE QH+ SN ++S L+ D  N     +QLE   AR+HDGY R
Sbjct: 10  VTAFLKKKGFTQTEKIFQEEFQHNKSNTSNSVLEPDIANHLLAFSQLETGPARFHDGYSR 69

Query: 157 LRSWAYRSLDSYKNELLRVLYPVFVHCFMDLVEKGHLQEARNFFN 291
           LR+W Y SLD YK+ELLRVLYPVF+HCFMDLV KGH+QEARNFFN
Sbjct: 70  LRTWTYSSLDLYKHELLRVLYPVFIHCFMDLVAKGHVQEARNFFN 114


>ref|XP_003522395.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
           [Glycine max]
          Length = 669

 Score =  131 bits (330), Expect = 5e-29
 Identities = 65/105 (61%), Positives = 78/105 (74%), Gaps = 8/105 (7%)
 Frame = +1

Query: 1   VSGYLKEKGFTQNA----EELQHSSSNNNDSSLQHDTLNR----TQLERDNARYHDGYGR 156
           V+ +LK+KGFTQ      EE QH+ SN ++S L+ D  N     +QLE   AR+HDGY R
Sbjct: 10  VTAFLKKKGFTQTEKIFQEEFQHNKSNTSNSLLEPDIANHLLAFSQLETGPARFHDGYSR 69

Query: 157 LRSWAYRSLDSYKNELLRVLYPVFVHCFMDLVEKGHLQEARNFFN 291
           LR+W Y SLD YK+ELLRVLYPVF+HCFMDLV KGH+QEARNFFN
Sbjct: 70  LRTWTYSSLDLYKHELLRVLYPVFIHCFMDLVAKGHVQEARNFFN 114


>ref|XP_003603301.1| Transcription initiation factor TFIID subunit [Medicago truncatula]
           gi|355492349|gb|AES73552.1| Transcription initiation
           factor TFIID subunit [Medicago truncatula]
          Length = 715

 Score =  120 bits (301), Expect = 1e-25
 Identities = 61/105 (58%), Positives = 76/105 (72%), Gaps = 9/105 (8%)
 Frame = +1

Query: 1   VSGYLKEKGFTQNA-----EELQHSSSNNNDSSLQHDTLNR----TQLERDNARYHDGYG 153
           V+ YLK+KGF Q       E  Q+ +S++++S L+ D  N     +QLE   ARYH+GY 
Sbjct: 10  VTAYLKKKGFKQTEKVFQEEFQQNKTSSSSNSILEPDIANHLHAFSQLENGPARYHNGYS 69

Query: 154 RLRSWAYRSLDSYKNELLRVLYPVFVHCFMDLVEKGHLQEARNFF 288
           RLR+W Y SLD YK+ELLRVLYPVF+HCFMDLV KGH+QEARNFF
Sbjct: 70  RLRTWTYSSLDLYKHELLRVLYPVFIHCFMDLVAKGHIQEARNFF 114


>ref|XP_003631761.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
           isoform 2 [Vitis vinifera] gi|296082065|emb|CBI21070.3|
           unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  114 bits (286), Expect = 6e-24
 Identities = 59/112 (52%), Positives = 73/112 (65%), Gaps = 15/112 (13%)
 Frame = +1

Query: 1   VSGYLKEKGFTQNA-------EELQHSSSNNNDSSLQHDT--------LNRTQLERDNAR 135
           V  YLK+KGF Q          + Q+  + N+ SS+   T        L+ ++ E   AR
Sbjct: 10  VIAYLKKKGFKQTELAFQEEHHQHQNQQTKNSSSSISSSTDPDIAKHILSFSESENIPAR 69

Query: 136 YHDGYGRLRSWAYRSLDSYKNELLRVLYPVFVHCFMDLVEKGHLQEARNFFN 291
           YH+GY +LRSW Y SLD YK+ELLRVLYPVF+HCFMDLV KGH+QEARNFFN
Sbjct: 70  YHEGYSKLRSWTYSSLDLYKHELLRVLYPVFIHCFMDLVAKGHIQEARNFFN 121


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