BLASTX nr result

ID: Glycyrrhiza24_contig00031031 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031031
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529677.1| PREDICTED: sister chromatid cohesion protein...   208   3e-52
ref|XP_003550468.1| PREDICTED: sister chromatid cohesion protein...   208   4e-52
ref|XP_003594308.1| Sister chromatid cohesion protein PDS5-like ...   184   6e-45
ref|XP_003547294.1| PREDICTED: sister chromatid cohesion protein...   181   4e-44
ref|XP_003534746.1| PREDICTED: sister chromatid cohesion protein...   179   2e-43

>ref|XP_003529677.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
           [Glycine max]
          Length = 1641

 Score =  208 bits (530), Expect = 3e-52
 Identities = 105/118 (88%), Positives = 111/118 (94%)
 Frame = +2

Query: 2   EESEDVREDLLSILLSTLGREKKGVTMAARRLAMNVIQQCAGKLEPDIKQFLLSLMSGDS 181
           EESEDVR+DLLSILLS LGREKKGV MAARRLAMNVIQQCAGKLEP IKQFLLSL+SGDS
Sbjct: 177 EESEDVRDDLLSILLSKLGREKKGVNMAARRLAMNVIQQCAGKLEPIIKQFLLSLISGDS 236

Query: 182 KLVNSQVEYHAVIYDLYCCAPQVLSGVLPYMTGELLTDQLETRLKAMNLVGDIISLPG 355
           K VNSQVEYH +IYDLYCCAPQ+LS +LPY+TGELLTDQLE RLKAMNLVGDIISLPG
Sbjct: 237 KPVNSQVEYHGIIYDLYCCAPQILSRILPYVTGELLTDQLEIRLKAMNLVGDIISLPG 294


>ref|XP_003550468.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
           [Glycine max]
          Length = 1642

 Score =  208 bits (529), Expect = 4e-52
 Identities = 105/118 (88%), Positives = 110/118 (93%)
 Frame = +2

Query: 2   EESEDVREDLLSILLSTLGREKKGVTMAARRLAMNVIQQCAGKLEPDIKQFLLSLMSGDS 181
           EESEDVRED+LSILLS LG EKKGV MA+RRLAMNVIQQC GKLEP IKQFLLSLMSGDS
Sbjct: 177 EESEDVREDILSILLSKLGCEKKGVNMASRRLAMNVIQQCVGKLEPIIKQFLLSLMSGDS 236

Query: 182 KLVNSQVEYHAVIYDLYCCAPQVLSGVLPYMTGELLTDQLETRLKAMNLVGDIISLPG 355
           K VNSQVEYH +IYDLYCCAPQ+LSGVLPY+TGELLTDQLE RLKAMNLVGDIISLPG
Sbjct: 237 KPVNSQVEYHGIIYDLYCCAPQILSGVLPYVTGELLTDQLEIRLKAMNLVGDIISLPG 294


>ref|XP_003594308.1| Sister chromatid cohesion protein PDS5-like protein [Medicago
           truncatula] gi|124359430|gb|ABN05881.1| HEAT [Medicago
           truncatula] gi|355483356|gb|AES64559.1| Sister chromatid
           cohesion protein PDS5-like protein [Medicago truncatula]
          Length = 1683

 Score =  184 bits (467), Expect = 6e-45
 Identities = 91/118 (77%), Positives = 105/118 (88%)
 Frame = +2

Query: 2   EESEDVREDLLSILLSTLGREKKGVTMAARRLAMNVIQQCAGKLEPDIKQFLLSLMSGDS 181
           EESEDVREDLLSILLS LGREK+ VT AAR+L+MNVIQQC G LEP IK+F LSL+SG S
Sbjct: 180 EESEDVREDLLSILLSMLGREKRDVTAAARKLSMNVIQQCIGTLEPSIKEFFLSLVSGKS 239

Query: 182 KLVNSQVEYHAVIYDLYCCAPQVLSGVLPYMTGELLTDQLETRLKAMNLVGDIISLPG 355
           K VNSQ++ H V+YD+ CCAPQ+LSG+LPY+TGEL TDQLETRLKA+NLVGDII+LPG
Sbjct: 240 KPVNSQLQNHEVLYDICCCAPQILSGILPYVTGELQTDQLETRLKAVNLVGDIIALPG 297


>ref|XP_003547294.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
           [Glycine max]
          Length = 1656

 Score =  181 bits (460), Expect = 4e-44
 Identities = 93/118 (78%), Positives = 103/118 (87%)
 Frame = +2

Query: 2   EESEDVREDLLSILLSTLGREKKGVTMAARRLAMNVIQQCAGKLEPDIKQFLLSLMSGDS 181
           EESEDV +DLLSILLS LGR K  VT AAR+L+MNVIQQ   KLEP IKQFLLSLMSGDS
Sbjct: 180 EESEDVHQDLLSILLSMLGRGKTNVTGAARKLSMNVIQQSMEKLEPCIKQFLLSLMSGDS 239

Query: 182 KLVNSQVEYHAVIYDLYCCAPQVLSGVLPYMTGELLTDQLETRLKAMNLVGDIISLPG 355
           K +NSQV+YH VIYDLYCCAPQ LSGVLPY+T EL+ D+LETRLKA+NLVGDII+LPG
Sbjct: 240 KTMNSQVQYHEVIYDLYCCAPQTLSGVLPYVTEELMADRLETRLKAVNLVGDIIALPG 297


>ref|XP_003534746.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
           [Glycine max]
          Length = 1648

 Score =  179 bits (455), Expect = 2e-43
 Identities = 92/118 (77%), Positives = 102/118 (86%)
 Frame = +2

Query: 2   EESEDVREDLLSILLSTLGREKKGVTMAARRLAMNVIQQCAGKLEPDIKQFLLSLMSGDS 181
           EESEDV +DLLSILLS LGR K  VT AAR+L+MNVIQQ   KLEP IKQFLLSLMSG S
Sbjct: 180 EESEDVHQDLLSILLSMLGRGKTDVTGAARKLSMNVIQQSMEKLEPSIKQFLLSLMSGGS 239

Query: 182 KLVNSQVEYHAVIYDLYCCAPQVLSGVLPYMTGELLTDQLETRLKAMNLVGDIISLPG 355
           K +NSQV+YH VI+DLYCCAPQ LSGVLPY+T EL+ DQLETRLKA+NLVGDII+LPG
Sbjct: 240 KTMNSQVQYHEVIFDLYCCAPQTLSGVLPYVTEELMADQLETRLKAVNLVGDIIALPG 297


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