BLASTX nr result

ID: Glycyrrhiza24_contig00031029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031029
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594551.1| Endoribonuclease Dicer [Medicago truncatula]...    80   2e-13
ref|XP_003546271.1| PREDICTED: endoribonuclease Dicer homolog 2-...    67   2e-09
ref|XP_003534774.1| PREDICTED: endoribonuclease Dicer homolog 2-...    64   1e-08
ref|XP_003535104.1| PREDICTED: endoribonuclease Dicer homolog 2-...    61   1e-07
gb|ACE60552.1| dicer-like protein 2 [Brassica rapa]                    58   7e-07

>ref|XP_003594551.1| Endoribonuclease Dicer [Medicago truncatula]
           gi|355483599|gb|AES64802.1| Endoribonuclease Dicer
           [Medicago truncatula]
          Length = 1418

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 44/63 (69%), Positives = 49/63 (77%)
 Frame = -3

Query: 189 PFSILFLNMLLETMEDTLMEIDSYGQQQDILDAALPFARSYQLEALEKAIRENTIVYLET 10
           P S+L      +TME+ LME+D Y +QQ I   ALPFARSYQLEALEKAIRENTIVYLET
Sbjct: 27  PISLLSKAGSSKTMEEALMEMDDYDEQQ-IRPNALPFARSYQLEALEKAIRENTIVYLET 85

Query: 9   GSG 1
           GSG
Sbjct: 86  GSG 88


>ref|XP_003546271.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
          Length = 285

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 36/51 (70%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
 Frame = -3

Query: 150 MEDTL-MEIDSYGQQQDILDAALPFARSYQLEALEKAIRENTIVYLETGSG 1
           ME+ L +E+DS  QQQ I    LPFA SYQLEAL+ AIRENTIVYLETGSG
Sbjct: 1   MEEVLSLEVDSNTQQQKITADVLPFAGSYQLEALDNAIRENTIVYLETGSG 51


>ref|XP_003534774.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
          Length = 1421

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 37/54 (68%), Positives = 42/54 (77%), Gaps = 2/54 (3%)
 Frame = -3

Query: 156 ETMEDT-LMEIDSYGQQ-QDILDAALPFARSYQLEALEKAIRENTIVYLETGSG 1
           ETME+   ME+D+  Q+ Q+I    LPFARSYQLEAL KAI ENTIVYLETGSG
Sbjct: 33  ETMEEAPSMEMDTDSQEDQNIAPDVLPFARSYQLEALYKAIHENTIVYLETGSG 86


>ref|XP_003535104.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
          Length = 1414

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 36/53 (67%), Positives = 42/53 (79%), Gaps = 3/53 (5%)
 Frame = -3

Query: 150 MEDTL-MEIDSYGQQQDILDAA--LPFARSYQLEALEKAIRENTIVYLETGSG 1
           ME+ L +E+DS  QQQ  + +A  L FARSYQLEAL+ AIRENTIVYLETGSG
Sbjct: 1   MEEVLPVEMDSNTQQQQKVISADVLSFARSYQLEALDNAIRENTIVYLETGSG 53


>gb|ACE60552.1| dicer-like protein 2 [Brassica rapa]
          Length = 1392

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/47 (57%), Positives = 37/47 (78%)
 Frame = -3

Query: 141 TLMEIDSYGQQQDILDAALPFARSYQLEALEKAIRENTIVYLETGSG 1
           T++++++    Q    + LPFARSYQ+EALEKA++ NTIVYLETGSG
Sbjct: 2   TIVDMETESADQVSASSPLPFARSYQVEALEKAMKRNTIVYLETGSG 48


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