BLASTX nr result

ID: Glycyrrhiza24_contig00031015 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031015
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551123.1| PREDICTED: DNA repair protein rhp7-like [Gly...    91   1e-16
ref|NP_001242431.1| uncharacterized protein LOC100797833 [Glycin...    87   1e-15
ref|XP_003546506.1| PREDICTED: uncharacterized F-box/LRR-repeat ...    77   2e-12
ref|XP_002516283.1| rad7, putative [Ricinus communis] gi|2235447...    71   1e-10
ref|XP_002326122.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10

>ref|XP_003551123.1| PREDICTED: DNA repair protein rhp7-like [Glycine max]
          Length = 675

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 55/86 (63%), Positives = 66/86 (76%), Gaps = 2/86 (2%)
 Frame = +1

Query: 1   LSDKGFYDLVSSDPVLRSLRSINLSHCSLLTPLSLHFLAGSLGSRLKELYLDNWVM-DAA 177
           LSDKG + LVSS P   +LRSINLS CSLL+  S++ LA SLGS LKELYLD+ +M DAA
Sbjct: 392 LSDKGLHVLVSSAP---ALRSINLSQCSLLSSASINILADSLGSLLKELYLDDCLMIDAA 448

Query: 178 EIMPALRCFEHLEVLSLTGID-VNDE 252
           +I+P L+  EHLEVLSL GI  V+DE
Sbjct: 449 QIVPGLKKLEHLEVLSLAGIQTVSDE 474


>ref|NP_001242431.1| uncharacterized protein LOC100797833 [Glycine max]
           gi|255637189|gb|ACU18925.1| unknown [Glycine max]
          Length = 375

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 2/86 (2%)
 Frame = +1

Query: 1   LSDKGFYDLVSSDPVLRSLRSINLSHCSLLTPLSLHFLAGSLGSRLKELYLDNWVM-DAA 177
           LSDKG + L SS P   +LRSINLS CSLL+  S++ LA SLGS LKELYLD+ +M DAA
Sbjct: 116 LSDKGLHVLASSAP---ALRSINLSQCSLLSSASINILADSLGSLLKELYLDDCLMIDAA 172

Query: 178 EIMPALRCFEHLEVLSLTGID-VNDE 252
           +I+P L+  +HLEVLSL GI  V+DE
Sbjct: 173 QIVPGLKELKHLEVLSLAGIQTVSDE 198


>ref|XP_003546506.1| PREDICTED: uncharacterized F-box/LRR-repeat protein C02F5.7-like
           [Glycine max]
          Length = 541

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 50/80 (62%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
 Frame = +1

Query: 1   LSDKGFYDLVSSDPVLRSLRSINLSHCSLLTPLSLHFLAGSLGSRLKELYLDNWV-MDAA 177
           LSD G   LVSS P   +LRSINLS CSLLT  S++ LA SL S LKELYLD+   +DAA
Sbjct: 258 LSDGGLRALVSSAP---ALRSINLSQCSLLTSSSVYILAESLKSLLKELYLDDCQGIDAA 314

Query: 178 EIMPALRCFEHLEVLSLTGI 237
            I+PAL   EHLEVLS+ GI
Sbjct: 315 LIVPALIELEHLEVLSVAGI 334


>ref|XP_002516283.1| rad7, putative [Ricinus communis] gi|223544769|gb|EEF46285.1| rad7,
           putative [Ricinus communis]
          Length = 765

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 46/80 (57%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
 Frame = +1

Query: 1   LSDKGFYDLVSSDPVLRSLRSINLSHCSLLTPLSLHFLAGSLGSRLKELYLDN-WVMDAA 177
           LSD G   LV+S     SLRSINLS CS LT  S+  LA SLGS L+ELY+D+   +DA 
Sbjct: 469 LSDIGLSLLVAS---ATSLRSINLSQCSHLTSTSIGTLADSLGSVLRELYIDDCQSLDAM 525

Query: 178 EIMPALRCFEHLEVLSLTGI 237
            I+P+L+  EHLEVLSL GI
Sbjct: 526 LILPSLKKLEHLEVLSLAGI 545


>ref|XP_002326122.1| predicted protein [Populus trichocarpa] gi|222833315|gb|EEE71792.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 45/85 (52%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
 Frame = +1

Query: 1   LSDKGFYDLVSSDPVLRSLRSINLSHCSLLTPLSLHFLAGSLGSRLKELYL-DNWVMDAA 177
           LSD     LVSS P L+SL   NLS CSLLT  S+  LA SL + L+ELY+ D   +   
Sbjct: 31  LSDAALSSLVSSAPALQSL---NLSQCSLLTSASMDTLADSLATSLRELYINDCQSIQPM 87

Query: 178 EIMPALRCFEHLEVLSLTGID-VND 249
            I+PAL+  EHLEVLSL+GI  +ND
Sbjct: 88  LILPALKKLEHLEVLSLSGIQTIND 112


Top