BLASTX nr result

ID: Glycyrrhiza24_contig00031009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00031009
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597616.1| hypothetical protein MTR_2g100200 [Medicago ...   138   4e-31
ref|XP_003547276.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   133   1e-29
ref|XP_002307761.1| predicted protein [Populus trichocarpa] gi|2...   113   2e-23
emb|CBI40732.3| unnamed protein product [Vitis vinifera]              107   8e-22
emb|CAN84084.1| hypothetical protein VITISV_018999 [Vitis vinifera]   107   8e-22

>ref|XP_003597616.1| hypothetical protein MTR_2g100200 [Medicago truncatula]
           gi|124360397|gb|ABN08410.1| Pentatricopeptide repeat
           [Medicago truncatula] gi|355486664|gb|AES67867.1|
           hypothetical protein MTR_2g100200 [Medicago truncatula]
          Length = 527

 Score =  138 bits (348), Expect = 4e-31
 Identities = 67/83 (80%), Positives = 72/83 (86%)
 Frame = +1

Query: 1   DSFVRAGHVSKAIQVFTNLDDLGLNRDAEALNVLLSCLCSRSHVCAAASIFNSMKGKIAF 180
           DSFV AGHVSKAIQ+F NLDDLGL RD E LNVLLSCLC R HV AAAS+FNSMKGK++F
Sbjct: 179 DSFVNAGHVSKAIQLFGNLDDLGLCRDTEVLNVLLSCLCRRCHVGAAASVFNSMKGKVSF 238

Query: 181 NVTTYNVVAGGWSKFGRVNEIER 249
           NV TYNVV GGWSK GRVNEIE+
Sbjct: 239 NVDTYNVVVGGWSKLGRVNEIEK 261


>ref|XP_003547276.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g43820-like [Glycine max]
          Length = 505

 Score =  133 bits (335), Expect = 1e-29
 Identities = 64/83 (77%), Positives = 72/83 (86%)
 Frame = +1

Query: 1   DSFVRAGHVSKAIQVFTNLDDLGLNRDAEALNVLLSCLCSRSHVCAAASIFNSMKGKIAF 180
           DSFVRAGHVS+AIQVF NLDDLG+ RD EALNVLL CLC RSHV AA S+ NSMKGK+ F
Sbjct: 153 DSFVRAGHVSRAIQVFGNLDDLGVRRDTEALNVLLLCLCRRSHVGAANSVLNSMKGKVDF 212

Query: 181 NVTTYNVVAGGWSKFGRVNEIER 249
           +V TYN VAGGWS+FGRV+E+ER
Sbjct: 213 DVGTYNAVAGGWSRFGRVSEVER 235


>ref|XP_002307761.1| predicted protein [Populus trichocarpa] gi|222857210|gb|EEE94757.1|
           predicted protein [Populus trichocarpa]
          Length = 563

 Score =  113 bits (282), Expect = 2e-23
 Identities = 57/84 (67%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
 Frame = +1

Query: 1   DSFVRAGHVSKAIQVFTNLDD-LGLNRDAEALNVLLSCLCSRSHVCAAASIFNSMKGKIA 177
           DS VRA  V KAIQ+F NL++  G  RDAE+LNVLL CLC RSHV AA S FNS+KGKI 
Sbjct: 210 DSLVRARRVYKAIQMFGNLEEEFGFERDAESLNVLLQCLCRRSHVGAANSYFNSVKGKIP 269

Query: 178 FNVTTYNVVAGGWSKFGRVNEIER 249
           FN  TYNV+ GGWSKFGRV+E++R
Sbjct: 270 FNCMTYNVIIGGWSKFGRVSEMQR 293


>emb|CBI40732.3| unnamed protein product [Vitis vinifera]
          Length = 520

 Score =  107 bits (268), Expect = 8e-22
 Identities = 49/83 (59%), Positives = 63/83 (75%)
 Frame = +1

Query: 1   DSFVRAGHVSKAIQVFTNLDDLGLNRDAEALNVLLSCLCSRSHVCAAASIFNSMKGKIAF 180
           DSF++A  VSKAI++F NL++ G   D E+LNVLL CLC RSHV AA   FN+MKG I F
Sbjct: 168 DSFIKARQVSKAIEMFRNLEEFGGKCDTESLNVLLQCLCQRSHVGAANLFFNAMKGGIPF 227

Query: 181 NVTTYNVVAGGWSKFGRVNEIER 249
           N  TYN++ GGWSK+G++ E+ER
Sbjct: 228 NCMTYNIIIGGWSKYGKIGEMER 250


>emb|CAN84084.1| hypothetical protein VITISV_018999 [Vitis vinifera]
          Length = 561

 Score =  107 bits (268), Expect = 8e-22
 Identities = 49/83 (59%), Positives = 63/83 (75%)
 Frame = +1

Query: 1   DSFVRAGHVSKAIQVFTNLDDLGLNRDAEALNVLLSCLCSRSHVCAAASIFNSMKGKIAF 180
           DSF++A  VSKAI++F NL++ G   D E+LNVLL CLC RSHV AA   FN+MKG I F
Sbjct: 209 DSFIKARQVSKAIEMFRNLEEFGGKCDTESLNVLLQCLCQRSHVGAANLFFNAMKGGIPF 268

Query: 181 NVTTYNVVAGGWSKFGRVNEIER 249
           N  TYN++ GGWSK+G++ E+ER
Sbjct: 269 NCMTYNIIIGGWSKYGKIGEMER 291


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