BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030999
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containi...   170   1e-40
ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containi...   167   1e-39
ref|XP_003621549.1| Pentatricopeptide repeat-containing protein ...   159   2e-37
ref|NP_190263.1| pentatricopeptide repeat-containing protein [Ar...   135   5e-30
ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containi...   134   6e-30

>ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  170 bits (431), Expect = 1e-40
 Identities = 81/88 (92%), Positives = 85/88 (96%)
 Frame = -3

Query: 266 KMVHGYVLRRGLDSILPVLNTLITMYGRCGEILMGQRVFDYMKNRDVVSWNSLISIYGMH 87
           K++HGY+LRRGLDSILPVLN LITMYGRCGEILMGQRVFD MKNRDVVSWNSLISIYGMH
Sbjct: 306 KLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMH 365

Query: 86  GFGKKAIQIFKNMIHQGVSPSYISFITV 3
           GFGKKAIQIF+NMIHQG SPSYISFITV
Sbjct: 366 GFGKKAIQIFENMIHQGSSPSYISFITV 393


>ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  167 bits (422), Expect = 1e-39
 Identities = 79/88 (89%), Positives = 84/88 (95%)
 Frame = -3

Query: 266 KMVHGYVLRRGLDSILPVLNTLITMYGRCGEILMGQRVFDYMKNRDVVSWNSLISIYGMH 87
           K++HGY+LRR LDSILPVLN LITMYGRCGE+LMGQRVFD MK RDVVSWNSLISIYGMH
Sbjct: 306 KLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMH 365

Query: 86  GFGKKAIQIFKNMIHQGVSPSYISFITV 3
           GFGKKAIQIF+NMIHQGVSPSYISFITV
Sbjct: 366 GFGKKAIQIFENMIHQGVSPSYISFITV 393


>ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87241485|gb|ABD33343.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355496564|gb|AES77767.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 654

 Score =  159 bits (403), Expect = 2e-37
 Identities = 76/88 (86%), Positives = 82/88 (93%)
 Frame = -3

Query: 266 KMVHGYVLRRGLDSILPVLNTLITMYGRCGEILMGQRVFDYMKNRDVVSWNSLISIYGMH 87
           K+VH YVLRRGLDS LPVLNTLITMYGRCGEI  GQRVFDYMK RDV+SWNSLISIYGMH
Sbjct: 302 KLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMH 361

Query: 86  GFGKKAIQIFKNMIHQGVSPSYISFITV 3
           G GKKAIQIF+NMI++GVSPSYI+FITV
Sbjct: 362 GLGKKAIQIFENMINRGVSPSYITFITV 389



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/90 (28%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
 Frame = -3

Query: 266 KMVHGYVLRRGLDSILPVLNTLITMYGRCGEILMGQRVFDYMKNRDVVSWNSLISIYGMH 87
           K +H ++LR G +  + V+ TL+ +Y R G +     VF  M ++++VSW+++I+ Y  +
Sbjct: 199 KEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKN 258

Query: 86  GFGKKAIQIFKNMIHQGVS--PSYISFITV 3
               KA+++F+ M+ +     P+ I+ ++V
Sbjct: 259 EMPMKALELFQIMMLEACDTVPNPITMVSV 288


>ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g46790, chloroplastic; AltName: Full=Protein
           CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
           gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis
           thaliana] gi|110741961|dbj|BAE98921.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332644684|gb|AEE78205.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 657

 Score =  135 bits (339), Expect = 5e-30
 Identities = 59/88 (67%), Positives = 78/88 (88%)
 Frame = -3

Query: 266 KMVHGYVLRRGLDSILPVLNTLITMYGRCGEILMGQRVFDYMKNRDVVSWNSLISIYGMH 87
           K++HGY+LRRGLDSILPV++ L+TMYGRCG++ +GQRVFD M +RDVVSWNSLIS YG+H
Sbjct: 305 KLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVH 364

Query: 86  GFGKKAIQIFKNMIHQGVSPSYISFITV 3
           G+GKKAIQIF+ M+  G SP+ ++F++V
Sbjct: 365 GYGKKAIQIFEEMLANGASPTPVTFVSV 392



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/90 (32%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
 Frame = -3

Query: 266 KMVHGYVLRRGLDSILPVLNTLITMYGRCGEILMGQRVFDYMKNRDVVSWNSLISIYGMH 87
           K +H ++ RRG  S + ++ TL+ MY R G +     VF  M  R+VVSW+++I+ Y  +
Sbjct: 202 KEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKN 261

Query: 86  GFGKKAIQIFKNMIHQ--GVSPSYISFITV 3
           G   +A++ F+ M+ +    SP+ ++ ++V
Sbjct: 262 GKAFEALRTFREMMRETKDSSPNSVTMVSV 291


>ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Vitis vinifera]
          Length = 658

 Score =  134 bits (338), Expect = 6e-30
 Identities = 61/88 (69%), Positives = 77/88 (87%)
 Frame = -3

Query: 266 KMVHGYVLRRGLDSILPVLNTLITMYGRCGEILMGQRVFDYMKNRDVVSWNSLISIYGMH 87
           K++HGY+LRRGLDSILPV++ L+T+Y RCG + +G RVF+ M+ RDVVSWNSLIS YG+H
Sbjct: 306 KLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIH 365

Query: 86  GFGKKAIQIFKNMIHQGVSPSYISFITV 3
           GFG+KAIQIFK MI QG+SPS ISF++V
Sbjct: 366 GFGRKAIQIFKEMIDQGLSPSPISFVSV 393



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 30/88 (34%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
 Frame = -3

Query: 260 VHGYVLRRGLDSILPVLNTLITMYGRCGEILMGQRVFDYMKNRDVVSWNSLISIYGMHGF 81
           +HG++LR G +  + ++ TL+ MY R G +L   RVFD M  ++VVSW+++I+ Y  +G 
Sbjct: 205 IHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGK 264

Query: 80  GKKAIQIFKNMI--HQGVSPSYISFITV 3
             +A+++F+ M+  +Q + P+ ++ ++V
Sbjct: 265 PLEALELFRKMMLENQDLLPNSVTMVSV 292