BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030981
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549365.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   173   2e-41
gb|AAC83020.1| Contains similarity to gi|1786244 hypothetical 24...   166   1e-39
dbj|BAD43982.1| unnamed protein product [Arabidopsis thaliana]        166   1e-39
ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thalian...   166   1e-39
ref|XP_002887761.1| hypothetical protein ARALYDRAFT_477057 [Arab...   162   3e-38

>ref|XP_003549365.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Glycine
           max]
          Length = 554

 Score =  173 bits (438), Expect = 2e-41
 Identities = 80/87 (91%), Positives = 83/87 (95%)
 Frame = +3

Query: 3   CAEALGTPIVGDYKYGWFVHSRWKQMARVDIEPTTGKPYRLRRPEGLDVQKGSVLSRVPL 182
           CAEALGTPIVGDYKYGWFVHSRWKQM RVDIEPTTGKPY+LRRPEGLDVQKGSVLS+VPL
Sbjct: 435 CAEALGTPIVGDYKYGWFVHSRWKQMPRVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPL 494

Query: 183 LHLHCRELVLPNIAKFLHVLQKSSEEL 263
           LHLHCRELVLPNI KF+HVL  SSEEL
Sbjct: 495 LHLHCRELVLPNIVKFMHVLNNSSEEL 521


>gb|AAC83020.1| Contains similarity to gi|1786244 hypothetical 24.9 kD protein in
           surA-hepA intergenic region yab0 from Escherichia coli
           genome gb|AE000116, and to hypothetical YABO family
           PF|00849 [Arabidopsis thaliana]
          Length = 491

 Score =  166 bits (421), Expect = 1e-39
 Identities = 77/89 (86%), Positives = 84/89 (94%), Gaps = 1/89 (1%)
 Frame = +3

Query: 3   CAEALGTPIVGDYKYGWFVHSRWKQMARVDIEPTTGKPYRLRRPEGLDVQKGSVLSRVPL 182
           CAEALGTPIVGDYKYGWFVH RWKQM +VDIEPTTGKPY+LRRPEGLDVQKGSVLS+VPL
Sbjct: 371 CAEALGTPIVGDYKYGWFVHKRWKQMPQVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPL 430

Query: 183 LHLHCRELVLPNIAKFLHVL-QKSSEELH 266
           LHLHCRE+VLPNIAKFLHV+ Q+ +E LH
Sbjct: 431 LHLHCREMVLPNIAKFLHVMNQQETEPLH 459


>dbj|BAD43982.1| unnamed protein product [Arabidopsis thaliana]
          Length = 326

 Score =  166 bits (421), Expect = 1e-39
 Identities = 77/89 (86%), Positives = 84/89 (94%), Gaps = 1/89 (1%)
 Frame = +3

Query: 3   CAEALGTPIVGDYKYGWFVHSRWKQMARVDIEPTTGKPYRLRRPEGLDVQKGSVLSRVPL 182
           CAEALGTPIVGDYKYGWFVH RWKQM +VDIEPTTGKPY+LRRPEGLDVQKGSVLS+VPL
Sbjct: 206 CAEALGTPIVGDYKYGWFVHKRWKQMPQVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPL 265

Query: 183 LHLHCRELVLPNIAKFLHVL-QKSSEELH 266
           LHLHCRE+VLPNIAKFLHV+ Q+ +E LH
Sbjct: 266 LHLHCREMVLPNIAKFLHVMNQQETEPLH 294


>ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thaliana]
           gi|75110951|sp|Q5XET6.1|PUS3_ARATH RecName: Full=RNA
           pseudourine synthase 3, mitochondrial; AltName: Full=RNA
           pseudouridylate synthase 3; AltName: Full=RNA-uridine
           isomerase 3; Flags: Precursor gi|53850479|gb|AAU95416.1|
           At1g78910 [Arabidopsis thaliana]
           gi|56790228|gb|AAW30031.1| At1g78910 [Arabidopsis
           thaliana] gi|332198052|gb|AEE36173.1| RNA pseudourine
           synthase 3 [Arabidopsis thaliana]
          Length = 478

 Score =  166 bits (421), Expect = 1e-39
 Identities = 77/89 (86%), Positives = 84/89 (94%), Gaps = 1/89 (1%)
 Frame = +3

Query: 3   CAEALGTPIVGDYKYGWFVHSRWKQMARVDIEPTTGKPYRLRRPEGLDVQKGSVLSRVPL 182
           CAEALGTPIVGDYKYGWFVH RWKQM +VDIEPTTGKPY+LRRPEGLDVQKGSVLS+VPL
Sbjct: 358 CAEALGTPIVGDYKYGWFVHKRWKQMPQVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPL 417

Query: 183 LHLHCRELVLPNIAKFLHVL-QKSSEELH 266
           LHLHCRE+VLPNIAKFLHV+ Q+ +E LH
Sbjct: 418 LHLHCREMVLPNIAKFLHVMNQQETEPLH 446


>ref|XP_002887761.1| hypothetical protein ARALYDRAFT_477057 [Arabidopsis lyrata subsp.
           lyrata] gi|297333602|gb|EFH64020.1| hypothetical protein
           ARALYDRAFT_477057 [Arabidopsis lyrata subsp. lyrata]
          Length = 477

 Score =  162 bits (409), Expect = 3e-38
 Identities = 74/86 (86%), Positives = 79/86 (91%)
 Frame = +3

Query: 3   CAEALGTPIVGDYKYGWFVHSRWKQMARVDIEPTTGKPYRLRRPEGLDVQKGSVLSRVPL 182
           CAEALGT IVGDYKYGWFVH RWKQM +VDIEPTTGKPY+LRRPEGLDVQKGSVLS+VPL
Sbjct: 357 CAEALGTSIVGDYKYGWFVHKRWKQMPQVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPL 416

Query: 183 LHLHCRELVLPNIAKFLHVLQKSSEE 260
           LHLHCRE+VLPNIAKFLHVL +   E
Sbjct: 417 LHLHCREMVLPNIAKFLHVLNQQETE 442