BLASTX nr result

ID: Glycyrrhiza24_contig00030974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030974
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606056.1| 30S ribosomal protein S11 [Medicago truncatu...   209   1e-52
ref|XP_003605603.1| 30S ribosomal protein S11 [Medicago truncatu...   209   1e-52
ref|YP_002149764.1| RNA polymerase alpha subunit [Cicer arietinu...   209   1e-52
ref|YP_001381697.1| RNA polymerase alpha subunit [Medicago trunc...   209   1e-52
ref|YP_002456491.1| RNA polymerase alpha subunit [Trifolium subt...   209   2e-52

>ref|XP_003606056.1| 30S ribosomal protein S11 [Medicago truncatula]
           gi|355507111|gb|AES88253.1| 30S ribosomal protein S11
           [Medicago truncatula]
          Length = 466

 Score =  209 bits (533), Expect = 1e-52
 Identities = 104/108 (96%), Positives = 106/108 (98%)
 Frame = -3

Query: 325 PLMKGQADTIGIAMRRILLGEIEGTCITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIV 146
           PL KGQADTIGIAMRRILLGEIEGTCITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIV
Sbjct: 169 PLRKGQADTIGIAMRRILLGEIEGTCITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIV 228

Query: 145 LRSNLYGTRDASICFKGPGYVTAQDIILPPSVEIIDKTQHIANLTEPI 2
           L+SNLYGTRDASICFKGPGYVTAQDIILPPSVEI+D TQHIANLTEPI
Sbjct: 229 LKSNLYGTRDASICFKGPGYVTAQDIILPPSVEIVDNTQHIANLTEPI 276


>ref|XP_003605603.1| 30S ribosomal protein S11 [Medicago truncatula]
           gi|355506658|gb|AES87800.1| 30S ribosomal protein S11
           [Medicago truncatula]
          Length = 430

 Score =  209 bits (533), Expect = 1e-52
 Identities = 104/108 (96%), Positives = 106/108 (98%)
 Frame = -3

Query: 325 PLMKGQADTIGIAMRRILLGEIEGTCITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIV 146
           PL KGQADTIGIAMRRILLGEIEGTCITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIV
Sbjct: 158 PLRKGQADTIGIAMRRILLGEIEGTCITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIV 217

Query: 145 LRSNLYGTRDASICFKGPGYVTAQDIILPPSVEIIDKTQHIANLTEPI 2
           L+SNLYGTRDASICFKGPGYVTAQDIILPPSVEI+D TQHIANLTEPI
Sbjct: 218 LKSNLYGTRDASICFKGPGYVTAQDIILPPSVEIVDNTQHIANLTEPI 265


>ref|YP_002149764.1| RNA polymerase alpha subunit [Cicer arietinum]
           gi|197089831|gb|ACH41101.1| RNA polymerase alpha subunit
           [Cicer arietinum]
          Length = 333

 Score =  209 bits (533), Expect = 1e-52
 Identities = 105/108 (97%), Positives = 106/108 (98%)
 Frame = -3

Query: 325 PLMKGQADTIGIAMRRILLGEIEGTCITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIV 146
           PLMKGQADTIGIAMRRILLGEIEGTCITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIV
Sbjct: 36  PLMKGQADTIGIAMRRILLGEIEGTCITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIV 95

Query: 145 LRSNLYGTRDASICFKGPGYVTAQDIILPPSVEIIDKTQHIANLTEPI 2
           LRSNLYGTRDASICFKGPG VTAQDIILPPSVEI+D TQHIANLTEPI
Sbjct: 96  LRSNLYGTRDASICFKGPGSVTAQDIILPPSVEIVDNTQHIANLTEPI 143


>ref|YP_001381697.1| RNA polymerase alpha subunit [Medicago truncatula]
          Length = 333

 Score =  209 bits (533), Expect = 1e-52
 Identities = 104/108 (96%), Positives = 106/108 (98%)
 Frame = -3

Query: 325 PLMKGQADTIGIAMRRILLGEIEGTCITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIV 146
           PL KGQADTIGIAMRRILLGEIEGTCITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIV
Sbjct: 36  PLRKGQADTIGIAMRRILLGEIEGTCITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIV 95

Query: 145 LRSNLYGTRDASICFKGPGYVTAQDIILPPSVEIIDKTQHIANLTEPI 2
           L+SNLYGTRDASICFKGPGYVTAQDIILPPSVEI+D TQHIANLTEPI
Sbjct: 96  LKSNLYGTRDASICFKGPGYVTAQDIILPPSVEIVDNTQHIANLTEPI 143


>ref|YP_002456491.1| RNA polymerase alpha subunit [Trifolium subterraneum]
           gi|193788976|gb|ACF20572.1| RNA polymerase alpha subunit
           [Trifolium subterraneum]
          Length = 337

 Score =  209 bits (531), Expect = 2e-52
 Identities = 103/108 (95%), Positives = 106/108 (98%)
 Frame = -3

Query: 325 PLMKGQADTIGIAMRRILLGEIEGTCITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIV 146
           PLMKGQADTIGI MRRILLGEIEGTCITRAKSEKIPHEYSTIVGIQESIHEILMNLK+IV
Sbjct: 36  PLMKGQADTIGITMRRILLGEIEGTCITRAKSEKIPHEYSTIVGIQESIHEILMNLKQIV 95

Query: 145 LRSNLYGTRDASICFKGPGYVTAQDIILPPSVEIIDKTQHIANLTEPI 2
           LRSNLYGTRDASICFKGPGYVTA+DIILPPSVEI+D TQHIANLTEPI
Sbjct: 96  LRSNLYGTRDASICFKGPGYVTARDIILPPSVEIVDNTQHIANLTEPI 143


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