BLASTX nr result

ID: Glycyrrhiza24_contig00030958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030958
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540924.1| PREDICTED: putative DNA repair and recombina...   189   2e-46
ref|XP_003607480.1| Chromodomain-helicase-DNA-binding protein [M...   188   4e-46
ref|XP_002274640.2| PREDICTED: LOW QUALITY PROTEIN: putative DNA...   182   2e-44
emb|CBI21870.3| unnamed protein product [Vitis vinifera]              182   2e-44
ref|XP_003526273.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA...   182   3e-44

>ref|XP_003540924.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
           [Glycine max]
          Length = 870

 Score =  189 bits (480), Expect = 2e-46
 Identities = 86/93 (92%), Positives = 90/93 (96%)
 Frame = +1

Query: 1   KRKQHLVTVLHKYMLRRTKEETIGHLMMGKEDNIVFCAMSDLQKRAYRRMLQLPDIQCLI 180
           KRKQHLV VLHKY+LRRTKEETIGHLMMGKEDNIVFCAMSD+QKR YRRMLQLPDIQCLI
Sbjct: 348 KRKQHLVAVLHKYLLRRTKEETIGHLMMGKEDNIVFCAMSDVQKRVYRRMLQLPDIQCLI 407

Query: 181 NKDLPCSCGSPLTQVECCKRMVPDGVIWPYLHR 279
           NK+LPCSCGSPLTQVECCKR+VPDG IWPYLHR
Sbjct: 408 NKNLPCSCGSPLTQVECCKRIVPDGAIWPYLHR 440


>ref|XP_003607480.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
           gi|355508535|gb|AES89677.1|
           Chromodomain-helicase-DNA-binding protein [Medicago
           truncatula]
          Length = 1283

 Score =  188 bits (477), Expect = 4e-46
 Identities = 86/93 (92%), Positives = 90/93 (96%)
 Frame = +1

Query: 1   KRKQHLVTVLHKYMLRRTKEETIGHLMMGKEDNIVFCAMSDLQKRAYRRMLQLPDIQCLI 180
           KRKQHLV+VL+KYMLRRTKEETIGHLMMGKEDNIVFCAMSDLQKR YRRM+QLPDIQCLI
Sbjct: 667 KRKQHLVSVLNKYMLRRTKEETIGHLMMGKEDNIVFCAMSDLQKRIYRRMIQLPDIQCLI 726

Query: 181 NKDLPCSCGSPLTQVECCKRMVPDGVIWPYLHR 279
           NKDLPCSCGSPLTQVECCKR VPDG IWPYLH+
Sbjct: 727 NKDLPCSCGSPLTQVECCKRTVPDGAIWPYLHK 759


>ref|XP_002274640.2| PREDICTED: LOW QUALITY PROTEIN: putative DNA repair and
           recombination protein RAD26-like [Vitis vinifera]
          Length = 851

 Score =  182 bits (462), Expect = 2e-44
 Identities = 83/93 (89%), Positives = 88/93 (94%)
 Frame = +1

Query: 1   KRKQHLVTVLHKYMLRRTKEETIGHLMMGKEDNIVFCAMSDLQKRAYRRMLQLPDIQCLI 180
           +RKQHLV VLHKY+LRRTKEETIGHLMMGKEDN+VFCAMS+LQKR Y RMLQLPDIQCLI
Sbjct: 347 ERKQHLVAVLHKYLLRRTKEETIGHLMMGKEDNVVFCAMSELQKRVYTRMLQLPDIQCLI 406

Query: 181 NKDLPCSCGSPLTQVECCKRMVPDGVIWPYLHR 279
           NKDLPCSCGSPLTQVECCKR VP+GVIW YLHR
Sbjct: 407 NKDLPCSCGSPLTQVECCKRTVPNGVIWSYLHR 439


>emb|CBI21870.3| unnamed protein product [Vitis vinifera]
          Length = 874

 Score =  182 bits (462), Expect = 2e-44
 Identities = 83/93 (89%), Positives = 88/93 (94%)
 Frame = +1

Query: 1   KRKQHLVTVLHKYMLRRTKEETIGHLMMGKEDNIVFCAMSDLQKRAYRRMLQLPDIQCLI 180
           +RKQHLV VLHKY+LRRTKEETIGHLMMGKEDN+VFCAMS+LQKR Y RMLQLPDIQCLI
Sbjct: 347 ERKQHLVAVLHKYLLRRTKEETIGHLMMGKEDNVVFCAMSELQKRVYTRMLQLPDIQCLI 406

Query: 181 NKDLPCSCGSPLTQVECCKRMVPDGVIWPYLHR 279
           NKDLPCSCGSPLTQVECCKR VP+GVIW YLHR
Sbjct: 407 NKDLPCSCGSPLTQVECCKRTVPNGVIWSYLHR 439


>ref|XP_003526273.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA repair and
           recombination protein RAD26-like [Glycine max]
          Length = 483

 Score =  182 bits (461), Expect = 3e-44
 Identities = 83/93 (89%), Positives = 88/93 (94%)
 Frame = +1

Query: 1   KRKQHLVTVLHKYMLRRTKEETIGHLMMGKEDNIVFCAMSDLQKRAYRRMLQLPDIQCLI 180
           KRKQHLV VL KY+LRRTKE TIG+LMMGKEDNIVFCAMSD+QKR YRRMLQLPDIQCLI
Sbjct: 289 KRKQHLVAVLQKYLLRRTKEXTIGYLMMGKEDNIVFCAMSDVQKRVYRRMLQLPDIQCLI 348

Query: 181 NKDLPCSCGSPLTQVECCKRMVPDGVIWPYLHR 279
           NK+LPCSCGSPLTQVECCKR+VPDG IWPYLHR
Sbjct: 349 NKNLPCSCGSPLTQVECCKRLVPDGAIWPYLHR 381


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