BLASTX nr result

ID: Glycyrrhiza24_contig00030952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030952
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533799.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   298   4e-79
ref|XP_003606390.1| DEAD-box ATP-dependent RNA helicase [Medicag...   285   5e-75
ref|XP_003547512.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   276   1e-72
ref|XP_002325490.1| predicted protein [Populus trichocarpa] gi|2...   237   9e-61
ref|XP_002277600.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   235   4e-60

>ref|XP_003533799.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           17-like [Glycine max]
          Length = 596

 Score =  298 bits (763), Expect = 4e-79
 Identities = 155/191 (81%), Positives = 164/191 (85%), Gaps = 3/191 (1%)
 Frame = -1

Query: 566 SKIQRQNLLLSATLNEKVNHLAKISLDNPVMIGLDGQKIEPMSTITRLXXXXXXXXXXXX 387
           SKIQRQNLLLSATLNEKVNHLAK+SLDNPVMIGLDG+K+EP+STI RL            
Sbjct: 222 SKIQRQNLLLSATLNEKVNHLAKMSLDNPVMIGLDGKKMEPISTIKRLDSSESDEDSEDK 281

Query: 386 KT---PAVGAYNVPSQLFQRYLKAPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDAVD 216
            +   P VG Y VP QL QRY+K PCGSRLPVLLSILKHLFEREPSQKVV+FFSTCDAVD
Sbjct: 282 YSSKVPTVGDYKVPIQLIQRYMKVPCGSRLPVLLSILKHLFEREPSQKVVLFFSTCDAVD 341

Query: 215 FHYSLLSEFHFSAYPQTEDGVRQVFLGCKTLRLHGNMEQEDRTTSFQAFKTEKSALLLST 36
           FHYSLLSEF FS+YPQTE GVRQVFLGCKT RLHGNM+QEDR TSFQAFKTEKSALLLST
Sbjct: 342 FHYSLLSEFQFSSYPQTE-GVRQVFLGCKTFRLHGNMQQEDRRTSFQAFKTEKSALLLST 400

Query: 35  DVSARGLDFPK 3
           DVSARGLDFPK
Sbjct: 401 DVSARGLDFPK 411


>ref|XP_003606390.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355507445|gb|AES88587.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 613

 Score =  285 bits (728), Expect = 5e-75
 Identities = 146/191 (76%), Positives = 160/191 (83%), Gaps = 2/191 (1%)
 Frame = -1

Query: 572 RPSKIQRQNLLLSATLNEKVNHLAKISLDNPVMIGLDGQKIEPMSTIT--RLXXXXXXXX 399
           RPSK QRQNLLLSATLNEKVNHLAKISL++PVMIG+D + +EP S I             
Sbjct: 238 RPSKFQRQNLLLSATLNEKVNHLAKISLEDPVMIGIDDKIMEPTSRIRFDNSDCDEDNED 297

Query: 398 XXXXKTPAVGAYNVPSQLFQRYLKAPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDAV 219
               K PA+GAY VP QL QRY+K PCGSRL +LLSILKHLFEREPSQKVV+FFSTCDAV
Sbjct: 298 THSSKIPAIGAYKVPEQLIQRYMKVPCGSRLAILLSILKHLFEREPSQKVVLFFSTCDAV 357

Query: 218 DFHYSLLSEFHFSAYPQTEDGVRQVFLGCKTLRLHGNMEQEDRTTSFQAFKTEKSALLLS 39
           DFHYSL++EF FS+YPQTE+G R +FLGCKTLRLHGNMEQEDRTTSFQAFKTEKSALLLS
Sbjct: 358 DFHYSLITEFLFSSYPQTEEGNRTMFLGCKTLRLHGNMEQEDRTTSFQAFKTEKSALLLS 417

Query: 38  TDVSARGLDFP 6
           TDVSARGLDFP
Sbjct: 418 TDVSARGLDFP 428


>ref|XP_003547512.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           17-like [Glycine max]
          Length = 591

 Score =  276 bits (707), Expect = 1e-72
 Identities = 146/191 (76%), Positives = 155/191 (81%), Gaps = 3/191 (1%)
 Frame = -1

Query: 566 SKIQRQNLLLSATLNEKVNHLAKISLDNPVMIGLDGQKIEPMSTITRLXXXXXXXXXXXX 387
           SK+QRQNLLLS TLNE+VNHLAK+SLDNPVMIGLDG+K      I RL            
Sbjct: 222 SKMQRQNLLLSTTLNERVNHLAKMSLDNPVMIGLDGKKNGTNFNIKRLDPSESDEDSEDK 281

Query: 386 K---TPAVGAYNVPSQLFQRYLKAPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDAVD 216
                P VG Y VP QL QRY+K PCGSRLPVLLSILKHLFEREPSQKVV+FFSTCDAVD
Sbjct: 282 YYSKVPTVGDYKVPLQLIQRYMKVPCGSRLPVLLSILKHLFEREPSQKVVLFFSTCDAVD 341

Query: 215 FHYSLLSEFHFSAYPQTEDGVRQVFLGCKTLRLHGNMEQEDRTTSFQAFKTEKSALLLST 36
           FHYSLLSEF FS+Y QTE GV+QVFLGCKT RLHGNM+QEDR TSFQAFKTEKSALLLST
Sbjct: 342 FHYSLLSEFQFSSYSQTE-GVQQVFLGCKTFRLHGNMQQEDRRTSFQAFKTEKSALLLST 400

Query: 35  DVSARGLDFPK 3
           DVSARGLDFPK
Sbjct: 401 DVSARGLDFPK 411


>ref|XP_002325490.1| predicted protein [Populus trichocarpa] gi|222862365|gb|EEE99871.1|
           predicted protein [Populus trichocarpa]
          Length = 594

 Score =  237 bits (605), Expect = 9e-61
 Identities = 125/192 (65%), Positives = 145/192 (75%), Gaps = 4/192 (2%)
 Frame = -1

Query: 566 SKIQRQNLLLSATLNEKVNHLAKISLDNPVMIGLDGQKIEPMSTITRLXXXXXXXXXXXX 387
           S  Q QNLLLSATLNEKVNHLAKISL+NPVMIGLD +KI+P  ++  +            
Sbjct: 218 SNFQGQNLLLSATLNEKVNHLAKISLENPVMIGLDDKKIQPDQSVDHIETAESDEDDGLG 277

Query: 386 KTP----AVGAYNVPSQLFQRYLKAPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDAV 219
            +     + G Y +P+QL QRY+K PCGSRL VLLSILK+LFERE S K+VVFFSTCDAV
Sbjct: 278 YSKVKNSSTGDYKLPAQLVQRYVKVPCGSRLAVLLSILKNLFEREASHKIVVFFSTCDAV 337

Query: 218 DFHYSLLSEFHFSAYPQTEDGVRQVFLGCKTLRLHGNMEQEDRTTSFQAFKTEKSALLLS 39
           DFHYSLLSEF +S   Q+E    + FL C TLRLHGNM+QEDR  +FQAFKTEKSALLLS
Sbjct: 338 DFHYSLLSEFCWSPNSQSEAEHTERFLRCNTLRLHGNMKQEDRRNTFQAFKTEKSALLLS 397

Query: 38  TDVSARGLDFPK 3
           TD++ARGLDFPK
Sbjct: 398 TDIAARGLDFPK 409


>ref|XP_002277600.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 17-like [Vitis
           vinifera]
          Length = 600

 Score =  235 bits (599), Expect = 4e-60
 Identities = 126/195 (64%), Positives = 147/195 (75%), Gaps = 7/195 (3%)
 Frame = -1

Query: 566 SKIQRQNLLLSATLNEKVNHLAKISLDNPVMIGLDGQKIEPMSTI-----TRLXXXXXXX 402
           S+ QRQNLLLSATLNEKVNHLA+ISL+NPV IGLDG+K++P   +               
Sbjct: 225 SEFQRQNLLLSATLNEKVNHLAQISLENPVTIGLDGKKMQPKPPLEHFGSVEFDVDEDSE 284

Query: 401 XXXXXKTPAVGAYNVPSQLFQRYLKAPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDA 222
                 +P+ G Y +P+QL QRY+K PCGSRL VLLSILKHLFERE SQK+VVFFSTCDA
Sbjct: 285 KLHKIISPSNGDYKLPAQLVQRYVKVPCGSRLVVLLSILKHLFEREASQKIVVFFSTCDA 344

Query: 221 VDFHYSLLSEFHFSA--YPQTEDGVRQVFLGCKTLRLHGNMEQEDRTTSFQAFKTEKSAL 48
           VDFHYSL S F + A  +P+TED  RQ+FL  KT +LHGNM+ EDR T+FQ FK EKSAL
Sbjct: 345 VDFHYSLFSAFLWPANLHPETED--RQMFLRFKTFQLHGNMKHEDRRTTFQTFKKEKSAL 402

Query: 47  LLSTDVSARGLDFPK 3
           LLSTDV+ARGLDFPK
Sbjct: 403 LLSTDVAARGLDFPK 417


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