BLASTX nr result

ID: Glycyrrhiza24_contig00030949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030949
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK41814.1| unknown [Lotus japonicus]                               77   1e-12
ref|XP_002517816.1| tRNA-dihydrouridine synthase A, putative [Ri...    75   4e-12
ref|XP_003537164.1| PREDICTED: tRNA-dihydrouridine synthase A-li...    74   1e-11
ref|XP_003599259.1| hypothetical protein MTR_3g030870 [Medicago ...    74   1e-11
ref|XP_002314040.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11

>gb|AFK41814.1| unknown [Lotus japonicus]
          Length = 425

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/47 (78%), Positives = 39/47 (82%)
 Frame = -1

Query: 254 FEETLVAIPDSVLDSPVAEPPSGRRDLFANIGSLLPPPYRTGEEDAV 114
           FEETLVAIPDSVLDSPV EP  GRRDLFAN+ SLLPPPY T EE  +
Sbjct: 376 FEETLVAIPDSVLDSPVVEPTPGRRDLFANMDSLLPPPYTTREEAVI 422


>ref|XP_002517816.1| tRNA-dihydrouridine synthase A, putative [Ricinus communis]
           gi|223543088|gb|EEF44623.1| tRNA-dihydrouridine synthase
           A, putative [Ricinus communis]
          Length = 375

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/45 (75%), Positives = 39/45 (86%)
 Frame = -1

Query: 254 FEETLVAIPDSVLDSPVAEPPSGRRDLFANIGSLLPPPYRTGEED 120
           FEETLVAIPD+VLDSP+AE PSGR+DLF N+  LLPPPY T E+D
Sbjct: 327 FEETLVAIPDTVLDSPIAEAPSGRQDLFTNVRGLLPPPYATREQD 371


>ref|XP_003537164.1| PREDICTED: tRNA-dihydrouridine synthase A-like [Glycine max]
          Length = 372

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 36/47 (76%), Positives = 39/47 (82%)
 Frame = -1

Query: 254 FEETLVAIPDSVLDSPVAEPPSGRRDLFANIGSLLPPPYRTGEEDAV 114
           FEETLVAIPDSVLDS V +P SGR D+FANI S LPPPYRT EED +
Sbjct: 326 FEETLVAIPDSVLDSAVVKPQSGRGDIFANIYSSLPPPYRTREEDVI 372


>ref|XP_003599259.1| hypothetical protein MTR_3g030870 [Medicago truncatula]
           gi|355488307|gb|AES69510.1| hypothetical protein
           MTR_3g030870 [Medicago truncatula]
          Length = 102

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 37/46 (80%), Positives = 39/46 (84%)
 Frame = -1

Query: 251 EETLVAIPDSVLDSPVAEPPSGRRDLFANIGSLLPPPYRTGEEDAV 114
           EETLVAIPDSVLDS  A+ P GR DLFANI SLLPPPYRT +EDAV
Sbjct: 54  EETLVAIPDSVLDSSFAKSPPGRGDLFANIDSLLPPPYRTRDEDAV 99


>ref|XP_002314040.1| predicted protein [Populus trichocarpa] gi|222850448|gb|EEE87995.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 35/47 (74%), Positives = 38/47 (80%)
 Frame = -1

Query: 254 FEETLVAIPDSVLDSPVAEPPSGRRDLFANIGSLLPPPYRTGEEDAV 114
           FEETL AIPD+VLDSPVAE PSGR DLFAN+  LLPPPY T  E+ V
Sbjct: 329 FEETLAAIPDAVLDSPVAELPSGRIDLFANVRGLLPPPYETRTEEVV 375


Top