BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030943
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556327.1| PREDICTED: probable RNA polymerase II transc...   256   2e-66
ref|XP_003535467.1| PREDICTED: probable RNA polymerase II transc...   254   5e-66
ref|XP_003591640.1| General transcription factor IIH subunit [Me...   248   4e-64
gb|ABE86684.1| general transcription factor IIH component, relat...   248   4e-64
ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc...   205   3e-51

>ref|XP_003556327.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1-like [Glycine max]
          Length = 587

 Score =  256 bits (653), Expect = 2e-66
 Identities = 127/146 (86%), Positives = 139/146 (95%)
 Frame = +1

Query: 1   IRCSLGSEEAYGSLRASISKIKAMGLRDPLFSPEIALKVLNGLTKNISSTKSHLGRNSQE 180
           ++CSLGSEEAYGSLRASISKIK  GLRDPLFSP++ALKVLNGLTKNISS K HLGR+SQ 
Sbjct: 420 MKCSLGSEEAYGSLRASISKIKTTGLRDPLFSPDVALKVLNGLTKNISSPKYHLGRSSQG 479

Query: 181 SVLDILPDTTKEKLLDHWVCSQELLRHFWSSYPITTQSLMNKTRRLKDAISQIYSKLEEI 360
           SVLDILP+TTKE LLDHWVCSQELLRHFWSSYPITTQ+L+NKTRRLK++ISQIYSKLE+I
Sbjct: 480 SVLDILPNTTKETLLDHWVCSQELLRHFWSSYPITTQNLVNKTRRLKESISQIYSKLEDI 539

Query: 361 KVSAQSDLRHQVSLVVHPMQQALNAA 438
           KVSA+SDLRH VSLVVHPMQQALNAA
Sbjct: 540 KVSAESDLRHHVSLVVHPMQQALNAA 565


>ref|XP_003535467.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1-like [Glycine max]
          Length = 604

 Score =  254 bits (649), Expect = 5e-66
 Identities = 124/146 (84%), Positives = 141/146 (96%)
 Frame = +1

Query: 1   IRCSLGSEEAYGSLRASISKIKAMGLRDPLFSPEIALKVLNGLTKNISSTKSHLGRNSQE 180
           ++CSLGSEEAY SLRASISKIK  GLRDPLFSP++ALKVLNGLTKNI+STK HLG++SQE
Sbjct: 437 MKCSLGSEEAYDSLRASISKIKTTGLRDPLFSPDVALKVLNGLTKNITSTKYHLGKSSQE 496

Query: 181 SVLDILPDTTKEKLLDHWVCSQELLRHFWSSYPITTQSLMNKTRRLKDAISQIYSKLEEI 360
           SVLDILP++TKEKLLDHWVCSQELLRHFWSSYP++TQ+L++KTRRLKD+ISQIYSKLE+I
Sbjct: 497 SVLDILPNSTKEKLLDHWVCSQELLRHFWSSYPVSTQNLVSKTRRLKDSISQIYSKLEDI 556

Query: 361 KVSAQSDLRHQVSLVVHPMQQALNAA 438
           KVSA+SDLRH VSLVVHPMQQALNAA
Sbjct: 557 KVSAESDLRHHVSLVVHPMQQALNAA 582


>ref|XP_003591640.1| General transcription factor IIH subunit [Medicago truncatula]
           gi|355480688|gb|AES61891.1| General transcription factor
           IIH subunit [Medicago truncatula]
          Length = 586

 Score =  248 bits (633), Expect = 4e-64
 Identities = 125/146 (85%), Positives = 137/146 (93%)
 Frame = +1

Query: 1   IRCSLGSEEAYGSLRASISKIKAMGLRDPLFSPEIALKVLNGLTKNISSTKSHLGRNSQE 180
           IRC+LGSEEAYGSLR SIS IK MGLRDPL S E+A KVL+ LTKNISSTKS+LG++SQE
Sbjct: 419 IRCNLGSEEAYGSLRESISNIKTMGLRDPLLSHEVAFKVLSELTKNISSTKSNLGKSSQE 478

Query: 181 SVLDILPDTTKEKLLDHWVCSQELLRHFWSSYPITTQSLMNKTRRLKDAISQIYSKLEEI 360
           SVLDILP+TTKEKLLDHWVCSQELLRHFWSSYP+T QSL++K RRLKDAISQIYSKLEEI
Sbjct: 479 SVLDILPNTTKEKLLDHWVCSQELLRHFWSSYPVTKQSLVDKARRLKDAISQIYSKLEEI 538

Query: 361 KVSAQSDLRHQVSLVVHPMQQALNAA 438
           KVSA+SDLRHQVSLVVHPMQQAL+AA
Sbjct: 539 KVSAKSDLRHQVSLVVHPMQQALDAA 564


>gb|ABE86684.1| general transcription factor IIH component, related [Medicago
           truncatula]
          Length = 370

 Score =  248 bits (633), Expect = 4e-64
 Identities = 125/146 (85%), Positives = 137/146 (93%)
 Frame = +1

Query: 1   IRCSLGSEEAYGSLRASISKIKAMGLRDPLFSPEIALKVLNGLTKNISSTKSHLGRNSQE 180
           IRC+LGSEEAYGSLR SIS IK MGLRDPL S E+A KVL+ LTKNISSTKS+LG++SQE
Sbjct: 203 IRCNLGSEEAYGSLRESISNIKTMGLRDPLLSHEVAFKVLSELTKNISSTKSNLGKSSQE 262

Query: 181 SVLDILPDTTKEKLLDHWVCSQELLRHFWSSYPITTQSLMNKTRRLKDAISQIYSKLEEI 360
           SVLDILP+TTKEKLLDHWVCSQELLRHFWSSYP+T QSL++K RRLKDAISQIYSKLEEI
Sbjct: 263 SVLDILPNTTKEKLLDHWVCSQELLRHFWSSYPVTKQSLVDKARRLKDAISQIYSKLEEI 322

Query: 361 KVSAQSDLRHQVSLVVHPMQQALNAA 438
           KVSA+SDLRHQVSLVVHPMQQAL+AA
Sbjct: 323 KVSAKSDLRHQVSLVVHPMQQALDAA 348


>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 [Vitis vinifera]
           gi|296090002|emb|CBI39821.3| unnamed protein product
           [Vitis vinifera]
          Length = 602

 Score =  205 bits (521), Expect = 3e-51
 Identities = 104/146 (71%), Positives = 119/146 (81%)
 Frame = +1

Query: 1   IRCSLGSEEAYGSLRASISKIKAMGLRDPLFSPEIALKVLNGLTKNISSTKSHLGRNSQE 180
           I+CSL ++EAYGSLR  IS+IK++GL DP+  P+IALKVLNGLT+NISSTK HLG+N QE
Sbjct: 434 IKCSLSTQEAYGSLRGFISEIKSVGLSDPIVKPDIALKVLNGLTQNISSTKFHLGKNPQE 493

Query: 181 SVLDILPDTTKEKLLDHWVCSQELLRHFWSSYPITTQSLMNKTRRLKDAISQIYSKLEEI 360
           SVLD LP  TKE+LL HW   QELLRHFWSSYPITT  L  K  RLKDA+SQIY KL+EI
Sbjct: 494 SVLDRLPIITKEELLHHWTSIQELLRHFWSSYPITTTYLYTKASRLKDAMSQIYPKLQEI 553

Query: 361 KVSAQSDLRHQVSLVVHPMQQALNAA 438
           K S QSD RHQVSL+V PM QAL+AA
Sbjct: 554 KESVQSDFRHQVSLLVQPMLQALDAA 579