BLASTX nr result

ID: Glycyrrhiza24_contig00030942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030942
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518746.1| PREDICTED: uncharacterized membrane protein ...   127   7e-28
ref|XP_003613914.1| Membrane protein, putative [Medicago truncat...   115   3e-24
ref|XP_002269926.1| PREDICTED: uncharacterized membrane protein ...   108   5e-22
ref|XP_002311322.1| predicted protein [Populus trichocarpa] gi|2...   103   2e-20
ref|XP_002316110.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20

>ref|XP_003518746.1| PREDICTED: uncharacterized membrane protein YLR241W-like [Glycine
           max]
          Length = 698

 Score =  127 bits (320), Expect = 7e-28
 Identities = 65/87 (74%), Positives = 74/87 (85%)
 Frame = -1

Query: 262 VESFFKELYPSTYLSHVVVRRTSKIRSLLSDAKILYKRVSQLQSDPTQQKNKHGGLFGLF 83
           V+SFF ELYPSTYLSHVVVRRT KIRSL+++AK +YKRV+QL+SD TQQKN   G  GLF
Sbjct: 209 VQSFFSELYPSTYLSHVVVRRTGKIRSLVNEAKKMYKRVTQLRSDSTQQKNTQRGFPGLF 268

Query: 82  GRKNNREHYEKKLEDIEENVRLKQSEA 2
            RKN+  +YEKKLEDIEENVRLKQ EA
Sbjct: 269 SRKNSVIYYEKKLEDIEENVRLKQLEA 295


>ref|XP_003613914.1| Membrane protein, putative [Medicago truncatula]
           gi|355515249|gb|AES96872.1| Membrane protein, putative
           [Medicago truncatula]
          Length = 711

 Score =  115 bits (289), Expect = 3e-24
 Identities = 59/88 (67%), Positives = 73/88 (82%), Gaps = 1/88 (1%)
 Frame = -1

Query: 262 VESFFKELYPSTYLSHVVVRRTSKIRSLLSDAKILYKRVSQLQSDPTQQKNKHGGLFGLF 83
           V+SFFKELYPS+YLSHVVVRRTSKIRSL++DA  +YK+V+Q + DPT++K K G    LF
Sbjct: 208 VDSFFKELYPSSYLSHVVVRRTSKIRSLVNDANNMYKKVAQSRPDPTKEKIKQGAFSRLF 267

Query: 82  GRKNNR-EHYEKKLEDIEENVRLKQSEA 2
            ++NN  E YEK+L +IEENVRLKQSEA
Sbjct: 268 HQRNNHIERYEKQLAEIEENVRLKQSEA 295


>ref|XP_002269926.1| PREDICTED: uncharacterized membrane protein C2G11.09 [Vitis
           vinifera]
          Length = 715

 Score =  108 bits (270), Expect = 5e-22
 Identities = 55/87 (63%), Positives = 70/87 (80%), Gaps = 1/87 (1%)
 Frame = -1

Query: 262 VESFFKELYPSTYLSHVVVRRTSKIRSLLSDAKILYKRVSQLQSDPTQQKNKHGGLFGLF 83
           VE+FF E YPSTYLS+VVVRRT+++R L++DAK LYK++ +LQS+P Q K K G  FGLF
Sbjct: 209 VENFFTEYYPSTYLSNVVVRRTNRLRGLINDAKKLYKKLDRLQSEPNQPKLKRGCCFGLF 268

Query: 82  GRKNNR-EHYEKKLEDIEENVRLKQSE 5
           G K +  + YEKKLE +EENVRL+QSE
Sbjct: 269 GEKVDLVDQYEKKLEGLEENVRLEQSE 295


>ref|XP_002311322.1| predicted protein [Populus trichocarpa] gi|222851142|gb|EEE88689.1|
           predicted protein [Populus trichocarpa]
          Length = 714

 Score =  103 bits (256), Expect = 2e-20
 Identities = 51/86 (59%), Positives = 69/86 (80%)
 Frame = -1

Query: 262 VESFFKELYPSTYLSHVVVRRTSKIRSLLSDAKILYKRVSQLQSDPTQQKNKHGGLFGLF 83
           VESFF E YP+TYLSH+VVRRTSK++SL++DAK LY+R+  LQS+P++QK K  GLF   
Sbjct: 209 VESFFTEYYPTTYLSHIVVRRTSKVQSLINDAKQLYRRLLHLQSEPSEQKYKQVGLFE-- 266

Query: 82  GRKNNREHYEKKLEDIEENVRLKQSE 5
            + +  +HY K+LED+E+N RL+QSE
Sbjct: 267 KKVDLLDHYGKRLEDLEQNARLEQSE 292


>ref|XP_002316110.1| predicted protein [Populus trichocarpa] gi|222865150|gb|EEF02281.1|
           predicted protein [Populus trichocarpa]
          Length = 712

 Score =  101 bits (251), Expect = 7e-20
 Identities = 51/87 (58%), Positives = 68/87 (78%)
 Frame = -1

Query: 262 VESFFKELYPSTYLSHVVVRRTSKIRSLLSDAKILYKRVSQLQSDPTQQKNKHGGLFGLF 83
           VESFF E +P+TYLSH V+RRTSK++SL+ DA  LYKR+  LQS+P++QK K  GL G  
Sbjct: 209 VESFFTEYHPTTYLSHTVLRRTSKVQSLIKDANKLYKRLLHLQSEPSEQKYKRVGLCG-- 266

Query: 82  GRKNNREHYEKKLEDIEENVRLKQSEA 2
            + +  +HY K+L+D+E+NVRLKQSEA
Sbjct: 267 HKVDLLDHYGKRLDDLEQNVRLKQSEA 293


Top