BLASTX nr result

ID: Glycyrrhiza24_contig00030935 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030935
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ61446.1| R2R3-MYB transcription factor [Lupinus albus]          74   1e-11
ref|XP_003543825.1| PREDICTED: transcription factor GAMYB-like [...    72   4e-11
ref|XP_003556814.1| PREDICTED: transcription factor GAMYB-like [...    72   6e-11
ref|XP_002313492.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
ref|XP_002298147.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>dbj|BAJ61446.1| R2R3-MYB transcription factor [Lupinus albus]
          Length = 410

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 39/73 (53%), Positives = 52/73 (71%), Gaps = 3/73 (4%)
 Frame = -3

Query: 214 PASPLPSFESVDTLIQSPPIEPIQSGHVSPQCSGLLESIIY---NFKGSNVDSLQEKTDN 44
           P SPLPS ESVDTLIQ PP +  +S  +SP+ SGLL++II+   N KGSN +SL++   N
Sbjct: 254 PTSPLPSLESVDTLIQPPPTDLARSDPLSPRSSGLLDAIIWESKNSKGSNSNSLKQTAGN 313

Query: 43  RVRSEAVKSSIFN 5
            + +EA+KSS  N
Sbjct: 314 CISNEAIKSSTLN 326


>ref|XP_003543825.1| PREDICTED: transcription factor GAMYB-like [Glycine max]
          Length = 524

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 38/58 (65%), Positives = 44/58 (75%), Gaps = 3/58 (5%)
 Frame = -3

Query: 214 PASPLPSFESVDTLIQSPPIEPIQSGHVSPQCSGLLESIIYN---FKGSNVDSLQEKT 50
           P SPLPS ESVDTLIQSP +EPI S  +SPQ SGLLE+I+YN    KGSN D L ++T
Sbjct: 338 PMSPLPSLESVDTLIQSPTLEPILSDPISPQSSGLLEAIVYNSKSLKGSNNDLLLQET 395


>ref|XP_003556814.1| PREDICTED: transcription factor GAMYB-like [Glycine max]
          Length = 492

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 41/73 (56%), Positives = 49/73 (67%), Gaps = 3/73 (4%)
 Frame = -3

Query: 214 PASPLPSFESVDTLIQSPPIEPIQSGHVSPQCSGLLESIIYN---FKGSNVDSLQEKTDN 44
           P SPLPS ESVDTLIQSP +EPI    +SPQ SGLLE+I++N    KGSN D L ++T  
Sbjct: 336 PTSPLPSLESVDTLIQSPVVEPILLDPISPQSSGLLEAIVHNSKSLKGSNNDLLLQETIG 395

Query: 43  RVRSEAVKSSIFN 5
              +E  KSS  N
Sbjct: 396 -TTNEVAKSSTLN 407


>ref|XP_002313492.1| predicted protein [Populus trichocarpa] gi|222849900|gb|EEE87447.1|
           predicted protein [Populus trichocarpa]
          Length = 516

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/44 (59%), Positives = 35/44 (79%)
 Frame = -3

Query: 214 PASPLPSFESVDTLIQSPPIEPIQSGHVSPQCSGLLESIIYNFK 83
           P SPLPS ESVDTLIQSPP + ++S   SP+ SGLLE+++Y ++
Sbjct: 340 PTSPLPSLESVDTLIQSPPTKEMRSDGQSPRSSGLLEAVLYEYR 383


>ref|XP_002298147.1| predicted protein [Populus trichocarpa] gi|222845405|gb|EEE82952.1|
           predicted protein [Populus trichocarpa]
          Length = 553

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/41 (63%), Positives = 33/41 (80%)
 Frame = -3

Query: 214 PASPLPSFESVDTLIQSPPIEPIQSGHVSPQCSGLLESIIY 92
           PASPLPS ESVDT IQSPP +  +S  +SP+ SGLLE+++Y
Sbjct: 377 PASPLPSLESVDTFIQSPPTKETKSDGLSPRSSGLLEAVLY 417


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