BLASTX nr result

ID: Glycyrrhiza24_contig00030928 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030928
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547270.1| PREDICTED: katanin p60 ATPase-containing sub...   154   9e-36
ref|XP_002331561.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_002518418.1| 26S protease regulatory subunit, putative [R...   134   1e-29
ref|XP_002267342.2| PREDICTED: AAA ATPase forming ring-shaped co...   128   4e-28
emb|CBI32999.3| unnamed protein product [Vitis vinifera]              128   4e-28

>ref|XP_003547270.1| PREDICTED: katanin p60 ATPase-containing subunit A1-like [Glycine
           max]
          Length = 573

 Score =  154 bits (388), Expect = 9e-36
 Identities = 77/82 (93%), Positives = 80/82 (97%)
 Frame = -2

Query: 248 LSVLLRQIDGFEQDKKVVVIAATNRKEDLDPALISRFDTLVAFGLPDHHNRQEIASKYAK 69
           LSVLLRQIDGFEQDKKVVVIAATNRKEDLDPALISRFD+++AFGLPDH NRQEIASKYAK
Sbjct: 424 LSVLLRQIDGFEQDKKVVVIAATNRKEDLDPALISRFDSMIAFGLPDHQNRQEIASKYAK 483

Query: 68  HLSKAELDELARVTEDMSGRDI 3
           HLSK ELDELARVTEDMSGRDI
Sbjct: 484 HLSKPELDELARVTEDMSGRDI 505


>ref|XP_002331561.1| predicted protein [Populus trichocarpa] gi|222873785|gb|EEF10916.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score =  140 bits (353), Expect = 1e-31
 Identities = 68/82 (82%), Positives = 78/82 (95%)
 Frame = -2

Query: 248 LSVLLRQIDGFEQDKKVVVIAATNRKEDLDPALISRFDTLVAFGLPDHHNRQEIASKYAK 69
           LSVLLRQIDGFEQDKKVVVIAATNRK+DLDPALISRFD+++ FGLPD  NRQEIA++YAK
Sbjct: 412 LSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALISRFDSMITFGLPDRQNRQEIAAQYAK 471

Query: 68  HLSKAELDELARVTEDMSGRDI 3
           HL+++EL+E ARVTEDMSGRDI
Sbjct: 472 HLTESELEEFARVTEDMSGRDI 493


>ref|XP_002518418.1| 26S protease regulatory subunit, putative [Ricinus communis]
           gi|223542263|gb|EEF43805.1| 26S protease regulatory
           subunit, putative [Ricinus communis]
          Length = 587

 Score =  134 bits (336), Expect = 1e-29
 Identities = 63/82 (76%), Positives = 76/82 (92%)
 Frame = -2

Query: 248 LSVLLRQIDGFEQDKKVVVIAATNRKEDLDPALISRFDTLVAFGLPDHHNRQEIASKYAK 69
           LSVLLRQIDGFEQDKKVVVIAATNRK+DLDPALISRFD+++ FGLPD  NRQEI ++YAK
Sbjct: 435 LSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALISRFDSMITFGLPDEQNRQEIVAQYAK 494

Query: 68  HLSKAELDELARVTEDMSGRDI 3
           HL +++++ELA+VT+ MSGRDI
Sbjct: 495 HLKRSDIEELAKVTDQMSGRDI 516


>ref|XP_002267342.2| PREDICTED: AAA ATPase forming ring-shaped complexes-like [Vitis
           vinifera] gi|297741773|emb|CBI33002.3| unnamed protein
           product [Vitis vinifera]
          Length = 596

 Score =  128 bits (322), Expect = 4e-28
 Identities = 61/82 (74%), Positives = 76/82 (92%)
 Frame = -2

Query: 248 LSVLLRQIDGFEQDKKVVVIAATNRKEDLDPALISRFDTLVAFGLPDHHNRQEIASKYAK 69
           LSV+LRQIDGFEQDKKVVVIAATNRK+DLDPAL+SRFD+++ FGLPD+H+RQ+IA+++AK
Sbjct: 446 LSVILRQIDGFEQDKKVVVIAATNRKQDLDPALMSRFDSMITFGLPDNHDRQKIAAQFAK 505

Query: 68  HLSKAELDELARVTEDMSGRDI 3
           HL+++EL E A  TE MSGRDI
Sbjct: 506 HLTESELVEFATATEGMSGRDI 527


>emb|CBI32999.3| unnamed protein product [Vitis vinifera]
          Length = 251

 Score =  128 bits (322), Expect = 4e-28
 Identities = 61/82 (74%), Positives = 76/82 (92%)
 Frame = -2

Query: 248 LSVLLRQIDGFEQDKKVVVIAATNRKEDLDPALISRFDTLVAFGLPDHHNRQEIASKYAK 69
           LSV+LRQIDGFEQDKKVVVIAATNRK+DLDPAL+SRFD+++ FGLPD+H+RQ+IA+++AK
Sbjct: 101 LSVILRQIDGFEQDKKVVVIAATNRKQDLDPALMSRFDSMITFGLPDNHDRQKIAAQFAK 160

Query: 68  HLSKAELDELARVTEDMSGRDI 3
           HL+++EL E A  TE MSGRDI
Sbjct: 161 HLTESELVEFATATEGMSGRDI 182


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