BLASTX nr result

ID: Glycyrrhiza24_contig00030927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030927
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001053006.2| Os04g0462900 [Oryza sativa Japonica Group] g...    59   4e-07
emb|CAE76006.1| B1358B12.15 [Oryza sativa Japonica Group]              59   4e-07
gb|ACG38869.1| prohibitin [Zea mays]                                   58   5e-07
ref|NP_001104967.1| prohibitin2 [Zea mays] gi|7716458|gb|AAF6838...    58   5e-07
ref|XP_003531805.1| PREDICTED: prohibitin-1, mitochondrial-like ...    58   7e-07

>ref|NP_001053006.2| Os04g0462900 [Oryza sativa Japonica Group]
           gi|255675532|dbj|BAF14920.2| Os04g0462900 [Oryza sativa
           Japonica Group]
          Length = 296

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 10/72 (13%)
 Frame = -1

Query: 254 GELDPPALLPPH----TNIGLKYN------VYKKVLKAVVAQVNAD*LLIDRPHVSSLIR 105
           G L PP    P     T++GL+Y+      +  +VLKAVVAQ NAD LL +RPHVS+L+R
Sbjct: 100 GLLSPPPTSVPFPTIFTSLGLEYDDKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVR 159

Query: 104 DRLVRCAKNFSL 69
           D L+R A+ F++
Sbjct: 160 DALIRRAREFNI 171


>emb|CAE76006.1| B1358B12.15 [Oryza sativa Japonica Group]
          Length = 287

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 10/72 (13%)
 Frame = -1

Query: 254 GELDPPALLPPH----TNIGLKYN------VYKKVLKAVVAQVNAD*LLIDRPHVSSLIR 105
           G L PP    P     T++GL+Y+      +  +VLKAVVAQ NAD LL +RPHVS+L+R
Sbjct: 100 GLLSPPPTSVPFPTIFTSLGLEYDDKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVR 159

Query: 104 DRLVRCAKNFSL 69
           D L+R A+ F++
Sbjct: 160 DALIRRAREFNI 171


>gb|ACG38869.1| prohibitin [Zea mays]
          Length = 284

 Score = 58.2 bits (139), Expect(2) = 5e-07
 Identities = 30/56 (53%), Positives = 42/56 (75%), Gaps = 6/56 (10%)
 Frame = -1

Query: 218 TNIGLKYN------VYKKVLKAVVAQVNAD*LLIDRPHVSSLIRDRLVRCAKNFSL 69
           T++GL+Y+      +  +VLKAVVAQ NAD LL DRPHVS+L+RD L+R A+ F++
Sbjct: 113 TSLGLEYDDKVLPSIGNEVLKAVVAQFNADQLLTDRPHVSALVRDALIRRAREFNI 168



 Score = 20.4 bits (41), Expect(2) = 5e-07
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = -2

Query: 271 TKDL*MENLILRL 233
           TKDL M NL LRL
Sbjct: 87  TKDLQMVNLTLRL 99


>ref|NP_001104967.1| prohibitin2 [Zea mays] gi|7716458|gb|AAF68385.1|AF236369_1
           prohibitin [Zea mays] gi|238014248|gb|ACR38159.1|
           unknown [Zea mays] gi|413918565|gb|AFW58497.1|
           prohibitin [Zea mays]
          Length = 284

 Score = 58.2 bits (139), Expect(2) = 5e-07
 Identities = 30/56 (53%), Positives = 42/56 (75%), Gaps = 6/56 (10%)
 Frame = -1

Query: 218 TNIGLKYN------VYKKVLKAVVAQVNAD*LLIDRPHVSSLIRDRLVRCAKNFSL 69
           T++GL+Y+      +  +VLKAVVAQ NAD LL DRPHVS+L+RD L+R A+ F++
Sbjct: 113 TSLGLEYDDKVLPSIGNEVLKAVVAQFNADQLLTDRPHVSALVRDALIRRAREFNI 168



 Score = 20.4 bits (41), Expect(2) = 5e-07
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = -2

Query: 271 TKDL*MENLILRL 233
           TKDL M NL LRL
Sbjct: 87  TKDLQMVNLTLRL 99


>ref|XP_003531805.1| PREDICTED: prohibitin-1, mitochondrial-like [Glycine max]
          Length = 280

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/55 (54%), Positives = 42/55 (76%), Gaps = 6/55 (10%)
 Frame = -1

Query: 215 NIGLKYN------VYKKVLKAVVAQVNAD*LLIDRPHVSSLIRDRLVRCAKNFSL 69
           N+GL+Y+      +  +VLKAVVAQ NAD LL DRPHVS+L+RD L+R A++F++
Sbjct: 114 NLGLEYDEKVLPSIGNEVLKAVVAQFNADQLLTDRPHVSALVRDGLIRRARDFNI 168


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