BLASTX nr result
ID: Glycyrrhiza24_contig00030927
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00030927 (443 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001053006.2| Os04g0462900 [Oryza sativa Japonica Group] g... 59 4e-07 emb|CAE76006.1| B1358B12.15 [Oryza sativa Japonica Group] 59 4e-07 gb|ACG38869.1| prohibitin [Zea mays] 58 5e-07 ref|NP_001104967.1| prohibitin2 [Zea mays] gi|7716458|gb|AAF6838... 58 5e-07 ref|XP_003531805.1| PREDICTED: prohibitin-1, mitochondrial-like ... 58 7e-07 >ref|NP_001053006.2| Os04g0462900 [Oryza sativa Japonica Group] gi|255675532|dbj|BAF14920.2| Os04g0462900 [Oryza sativa Japonica Group] Length = 296 Score = 58.9 bits (141), Expect = 4e-07 Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 10/72 (13%) Frame = -1 Query: 254 GELDPPALLPPH----TNIGLKYN------VYKKVLKAVVAQVNAD*LLIDRPHVSSLIR 105 G L PP P T++GL+Y+ + +VLKAVVAQ NAD LL +RPHVS+L+R Sbjct: 100 GLLSPPPTSVPFPTIFTSLGLEYDDKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVR 159 Query: 104 DRLVRCAKNFSL 69 D L+R A+ F++ Sbjct: 160 DALIRRAREFNI 171 >emb|CAE76006.1| B1358B12.15 [Oryza sativa Japonica Group] Length = 287 Score = 58.9 bits (141), Expect = 4e-07 Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 10/72 (13%) Frame = -1 Query: 254 GELDPPALLPPH----TNIGLKYN------VYKKVLKAVVAQVNAD*LLIDRPHVSSLIR 105 G L PP P T++GL+Y+ + +VLKAVVAQ NAD LL +RPHVS+L+R Sbjct: 100 GLLSPPPTSVPFPTIFTSLGLEYDDKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVR 159 Query: 104 DRLVRCAKNFSL 69 D L+R A+ F++ Sbjct: 160 DALIRRAREFNI 171 >gb|ACG38869.1| prohibitin [Zea mays] Length = 284 Score = 58.2 bits (139), Expect(2) = 5e-07 Identities = 30/56 (53%), Positives = 42/56 (75%), Gaps = 6/56 (10%) Frame = -1 Query: 218 TNIGLKYN------VYKKVLKAVVAQVNAD*LLIDRPHVSSLIRDRLVRCAKNFSL 69 T++GL+Y+ + +VLKAVVAQ NAD LL DRPHVS+L+RD L+R A+ F++ Sbjct: 113 TSLGLEYDDKVLPSIGNEVLKAVVAQFNADQLLTDRPHVSALVRDALIRRAREFNI 168 Score = 20.4 bits (41), Expect(2) = 5e-07 Identities = 10/13 (76%), Positives = 10/13 (76%) Frame = -2 Query: 271 TKDL*MENLILRL 233 TKDL M NL LRL Sbjct: 87 TKDLQMVNLTLRL 99 >ref|NP_001104967.1| prohibitin2 [Zea mays] gi|7716458|gb|AAF68385.1|AF236369_1 prohibitin [Zea mays] gi|238014248|gb|ACR38159.1| unknown [Zea mays] gi|413918565|gb|AFW58497.1| prohibitin [Zea mays] Length = 284 Score = 58.2 bits (139), Expect(2) = 5e-07 Identities = 30/56 (53%), Positives = 42/56 (75%), Gaps = 6/56 (10%) Frame = -1 Query: 218 TNIGLKYN------VYKKVLKAVVAQVNAD*LLIDRPHVSSLIRDRLVRCAKNFSL 69 T++GL+Y+ + +VLKAVVAQ NAD LL DRPHVS+L+RD L+R A+ F++ Sbjct: 113 TSLGLEYDDKVLPSIGNEVLKAVVAQFNADQLLTDRPHVSALVRDALIRRAREFNI 168 Score = 20.4 bits (41), Expect(2) = 5e-07 Identities = 10/13 (76%), Positives = 10/13 (76%) Frame = -2 Query: 271 TKDL*MENLILRL 233 TKDL M NL LRL Sbjct: 87 TKDLQMVNLTLRL 99 >ref|XP_003531805.1| PREDICTED: prohibitin-1, mitochondrial-like [Glycine max] Length = 280 Score = 58.2 bits (139), Expect = 7e-07 Identities = 30/55 (54%), Positives = 42/55 (76%), Gaps = 6/55 (10%) Frame = -1 Query: 215 NIGLKYN------VYKKVLKAVVAQVNAD*LLIDRPHVSSLIRDRLVRCAKNFSL 69 N+GL+Y+ + +VLKAVVAQ NAD LL DRPHVS+L+RD L+R A++F++ Sbjct: 114 NLGLEYDEKVLPSIGNEVLKAVVAQFNADQLLTDRPHVSALVRDGLIRRARDFNI 168