BLASTX nr result

ID: Glycyrrhiza24_contig00030923 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00030923
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314781.1| predicted protein [Populus trichocarpa] gi|2...   180   1e-43
gb|AFK42005.1| unknown [Medicago truncatula]                          180   1e-43
ref|XP_003519998.1| PREDICTED: cleavage and polyadenylation spec...   180   1e-43
ref|XP_002526000.1| cleavage and polyadenylation specificity fac...   180   1e-43
ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261...   179   3e-43

>ref|XP_002314781.1| predicted protein [Populus trichocarpa] gi|222863821|gb|EEF00952.1|
           predicted protein [Populus trichocarpa]
          Length = 639

 Score =  180 bits (457), Expect = 1e-43
 Identities = 89/95 (93%), Positives = 92/95 (96%)
 Frame = +1

Query: 1   LGAAMFYAKVRDTEMVYTGDYNMTPDRHLGAAQIDRLRLDLLITESTYATTIRDSKYARE 180
           LGAAMFYAKV D+ MVYTGDYNMTPDRHLGAAQIDRL LDLLITESTYATTIRDSKYARE
Sbjct: 158 LGAAMFYAKVGDSAMVYTGDYNMTPDRHLGAAQIDRLELDLLITESTYATTIRDSKYARE 217

Query: 181 REFLKAVHKCVSGGGKVLIPTFALGRAQELCILLD 285
           REFLKAVH+CV+GGGKVLIPTFALGRAQELCILLD
Sbjct: 218 REFLKAVHECVAGGGKVLIPTFALGRAQELCILLD 252


>gb|AFK42005.1| unknown [Medicago truncatula]
          Length = 534

 Score =  180 bits (456), Expect = 1e-43
 Identities = 90/95 (94%), Positives = 91/95 (95%)
 Frame = +1

Query: 1   LGAAMFYAKVRDTEMVYTGDYNMTPDRHLGAAQIDRLRLDLLITESTYATTIRDSKYARE 180
           +GAAMFY KV D EMVYTGDYNMTPDRHLGAAQIDRLRLDLLITESTYATTIRDSKYARE
Sbjct: 158 IGAAMFYVKVGDAEMVYTGDYNMTPDRHLGAAQIDRLRLDLLITESTYATTIRDSKYARE 217

Query: 181 REFLKAVHKCVSGGGKVLIPTFALGRAQELCILLD 285
           REFLKAVHKCVSGGGKVLIPTFALGRAQEL ILLD
Sbjct: 218 REFLKAVHKCVSGGGKVLIPTFALGRAQELRILLD 252


>ref|XP_003519998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-II-like [Glycine max]
          Length = 516

 Score =  180 bits (456), Expect = 1e-43
 Identities = 89/95 (93%), Positives = 92/95 (96%)
 Frame = +1

Query: 1   LGAAMFYAKVRDTEMVYTGDYNMTPDRHLGAAQIDRLRLDLLITESTYATTIRDSKYARE 180
           +GAAMFYAKV D EMVYTGDYNMTPDRHLGAAQIDRLRLDLLITESTYATTIRDS+YARE
Sbjct: 158 IGAAMFYAKVGDAEMVYTGDYNMTPDRHLGAAQIDRLRLDLLITESTYATTIRDSRYARE 217

Query: 181 REFLKAVHKCVSGGGKVLIPTFALGRAQELCILLD 285
           REFLKAVHKCVS GGKVLIPTFALGRAQELCILL+
Sbjct: 218 REFLKAVHKCVSCGGKVLIPTFALGRAQELCILLE 252


>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
           communis] gi|223534732|gb|EEF36424.1| cleavage and
           polyadenylation specificity factor, putative [Ricinus
           communis]
          Length = 963

 Score =  180 bits (456), Expect = 1e-43
 Identities = 88/95 (92%), Positives = 92/95 (96%)
 Frame = +1

Query: 1   LGAAMFYAKVRDTEMVYTGDYNMTPDRHLGAAQIDRLRLDLLITESTYATTIRDSKYARE 180
           LGAAMFYAKV D+ MVYTGDYNMTPDRHLGAAQIDRL+LDLLITESTYATTIRDSKYARE
Sbjct: 158 LGAAMFYAKVGDSAMVYTGDYNMTPDRHLGAAQIDRLQLDLLITESTYATTIRDSKYARE 217

Query: 181 REFLKAVHKCVSGGGKVLIPTFALGRAQELCILLD 285
           REFLK VHKCV+GGGKVLIPTFALGRAQELC+LLD
Sbjct: 218 REFLKVVHKCVAGGGKVLIPTFALGRAQELCLLLD 252


>ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
          Length = 2299

 Score =  179 bits (453), Expect = 3e-43
 Identities = 88/95 (92%), Positives = 91/95 (95%)
 Frame = +1

Query: 1    LGAAMFYAKVRDTEMVYTGDYNMTPDRHLGAAQIDRLRLDLLITESTYATTIRDSKYARE 180
            LGAAMFYAKV D  MVYTGDYNMTPDRHLGAAQIDRL+LDLLITESTYATT+RDSKYARE
Sbjct: 1407 LGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRLQLDLLITESTYATTVRDSKYARE 1466

Query: 181  REFLKAVHKCVSGGGKVLIPTFALGRAQELCILLD 285
            REFLKAVHKCV+ GGKVLIPTFALGRAQELCILLD
Sbjct: 1467 REFLKAVHKCVADGGKVLIPTFALGRAQELCILLD 1501


Top